Lepeophtheirus salmonis (salmon louse): 121119996
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Entry
121119996 CDS
T08214
Symbol
fra
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121119996 (fra)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lsm04515
]
121119996 (fra)
Cell adhesion molecules [BR:
lsm04515
]
Immunoglobulin superfamily
DCC/UNC5 family
121119996 (fra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
Ig_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
ig
Fn3_VIN3
V-set
Neogenin_C
Interfer-bind
C2-set_2
Ig_RIMBP2
Ig_5
CRLF2-like_D2
PhoD_N
Ig_J
Ig_PDGFR_d4
Motif
Other DBs
NCBI-GeneID:
121119996
NCBI-ProteinID:
XP_071745148
LinkDB
All DBs
Position
6:21679250..21970102
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AA seq
1448 aa
AA seq
DB search
MILQRTFFLLLFYVSLKLLKHVEGSNHVFPEFEFTKEPSDIFMKENESGLLLCSASTTST
ASPVEYKWKRNGHYLQYPDFNGRSSIYEDEFGRRLLSNGSLHFSWIYNSLTDPRDEGIYQ
CVADVKGLGKIVSKTAVLIVKDPPSFELEPSDLQVFLGQTAAFQCLLETPDNSEEELSSD
NIQWLKDDQPLILNHRISIKPSGMLEIINVEPSDRAKYSCVYGEELKSRSGKLTIDLDSA
SSLVNSPPNFIVKPRNRAVLQGTTLILDCAANGVPQPEITWLKDGASLDMSHLDSRLTKL
GKGSLKIQDLNAETDSGAYQCRAENTEDSQDVTAIVEVHSAPEFVVRPSNQMCSAKGDIT
FECKVQSFPPAKVQWYKNGELIVTSDYFQIVDGSNLRILGLLDSDAGMYQCMATNSVGNV
QSSAQLKVISNVVSPSLSSVSSSLDSSPSNDDQGSFIFLDTPSAPIDFHVAIAATRFITL
TWSSPLNPEGTILGYTVYYKEKGSERERVMNSTRGELSEVNIQGLTPGTSYEFRVLAFNE
NGRGEYSEMITVSTQDDIDVPGPVRNLRCRPTASFSILVAWDTPSTDTGFITQYKVCHRQ
GEYGFERSTIVKKMKYHLTDLREYTDYTFWVSASNANGEGVHSEEIKCMTYSDIPADPPT
NVTLEAASSRSILLRWEPPPKESQNGIISGYKLRYKKKGRGKSEIFTTDASRRLFVIPKL
FVGTEYQVKIAAMTVNGTGPSTPWLSISTFDSDRDESIVPNQPSSIRVRAMDDEIAITWT
PPKDSQILVRGYRMGWGKGVPDEYIHVVDEKQRFFRITDLKPNSEYVISLRAYNNIGDGR
PIYETVRTQEEYEEEVLTPLLPPVGLHTIVLSSYSIVLTWVDSSLPKNQVVSDYRYYIVR
YAPVNKSPIKYQYRNSTDLNCMIDDLRANAEYEFTVKIIKGRRMSPWSLVAMNKTLEAEP
SSAPRDLIIDSVGDGTVELSWIAPKYPNGRINGYIIQYTKNRKAAEIEWYVEAVVGAETE
ATLNGLDMDAKYFFKMSARNNKGYGPTSQVVSFKTPKDPAKSYSRANENVSPMILYAIFG
VGAGIIIVLIIGGTLLVRSKITASIPNENRHNKNYIHNDVGHGGPSAREKLNPPPPDLWI
GHDQLELKAIDGDETGETTLGRSTPDYRSASSMDRSRFNGPFSAVVSSQTNGSCNGSGTY
IRSQYSLDPPSLRSNNPVMSLESPDDLPPPGYDPSLCAPSEDCPSSTMGDLPWNHTTASS
SIDGSSTANQSGSGAIISQLPPMYLSSAMSTTSSDNSSSVSSATRNSKFPLKSFRAPSPN
SSHQPKNPLRPTPSSPFKRPLIGSLNMGGLLKLGSISSESPSSCSSSSTGASSSSNQNSN
SQYSTGHLPAIADVRSPDVLHPQNGPCDCLSHPIPHSLSTEELNADLKNLEGLMKDLSSM
GPSNQFNC
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgattcttcaaaggactttttttctactactcttttatgttagtctcaaactactaaaa
catgttgaaggtagcaaccatgttttcccggaatttgaatttaccaaagagccttcagat
atatttatgaaagaaaatgagtcaggtctacttttgtgctcagcgagtaccacctccacg
gcctctccagtggaatataaatggaaacgaaatggacattacctccaatatcctgacttt
aatggtcgaagttccatttatgaagatgaattcggaagacgtcttctctccaatgggtcc
cttcatttctcatggatatacaattctctgacggatccccgggatgagggaatttatcaa
tgtgtggctgatgttaaaggtcttgggaaaatcgtttcaaaaactgctgttcttatagtg
aaagatcccccttcatttgaattagagccttcagacttacaggtcttccttggccaaaca
gctgcttttcaatgccttttagaaacaccggacaatagtgaggaggaactctcatcagat
aacattcaatggctcaaggatgatcagccccttattttgaaccaccgtatatccatcaaa
ccatctggaatgttggagattatcaatgtagaaccctcagatcgtgccaaatatagctgc
gtttacggggaggaactcaagagtcggagtgggaaactaactattgatttagactctgcg
tcttcattggttaatagtccgcccaatttcattgtcaaaccccgaaaccgggctgtactc
caaggtacaactcttattttggattgtgctgcaaatggtgttcctcaaccagaaatcacg
tggctgaaagatggtgcttctctggatatgagtcatcttgactcccgtcttacgaagctt
ggtaaagggagtctcaaaatccaggatttaaacgcagaaaccgactcaggagcatatcaa
tgtcgagctgaaaatacagaagactctcaggacgttacagctattgttgaggtgcattct
gctccagagtttgtggtgaggccttcaaatcaaatgtgttctgccaagggggacattacg
ttcgagtgtaaggtccagagtttccctccagccaaggttcagtggtataagaatggagaa
ttgattgttacaagtgattactttcaaattgtagatggttcgaatctacgaatcctgggc
ctcctggattctgatgcagggatgtatcaatgtatggcaaccaactctgttgggaatgta
caatcatcagcacaactcaaagtcatttccaatgtggtttccccttcactctcatctgtg
tcatcatctctagatagtagtccttccaatgatgatcaaggatcctttatctttttggat
acaccttctgctccaatagacttccatgtggctattgcagccactcgtttcattactctt
acttggtcatctccattaaatccagagggaacaatccttggttatacagtgtattacaag
gaaaaaggatctgagcgagagcgggtcatgaattccacacgaggagaattatcagaggtc
aacattcaaggacttactcctggaacgtcctatgaatttagagttcttgcatttaatgaa
aatggtcgtggagaatattcagagatgatcactgtgtcaacccaggatgacatcgatgtt
ccgggtcctgttcggaacttgagatgtcgacctacagcttcattctccatacttgtggct
tgggatacgccatcaacggatactggattcattactcagtataaagtctgccatcgacag
ggtgaatacggttttgagagatccacaatcgtcaagaaaatgaagtatcatttaacagac
ctccgtgagtacacggactacactttttgggtctctgcgtcaaatgccaacggtgagggg
gttcattcagaagaaatcaagtgcatgacctatagtgacatacccgcggatccaccaaca
aatgtaacacttgaagcggcctcctccagatcaattctgctccggtgggaacctcctccc
aaagaatctcaaaatggaatcatctctggatacaaactacgatacaagaaaaaaggtcga
ggaaaatctgaaattttcacaaccgatgcgagtcggcgtctctttgtcattccaaaactt
tttgttggaaccgagtatcaagtcaaaattgcagccatgacggtgaacggaactgggccc
tcaactccttggctctctatatccacttttgattcagatagggatgagtccattgttccg
aatcaaccatcatcaattcgtgttcgagctatggatgatgaaattgccataacttggact
ccaccaaaggattcacaaatccttgtacgtggctacagaatgggctggggcaaaggagtg
ccggatgagtacatacatgtcgttgacgaaaaacaaagattttttcgcataacggacttg
aaacccaattcagagtacgttattagtttaagagcatacaataacatcggagatggacga
cccatctatgaaacagtgcgtactcaagaagaatatgaagaggaagtgttaacgcctctg
ctaccccctgtggggctgcatacaatcgtactctcatcctactctattgttctcacctgg
gttgactcctcactacctaaaaatcaagtcgtttcagactatcgctattacattgttaga
tatgctcctgtgaataaatctcccatcaaatatcaatatcgaaattctacagatctcaac
tgtatgattgacgatcttagagctaacgcagagtatgaatttacagttaaaataatcaaa
ggacggcgcatgagtccgtggagcttagttgcaatgaataaaacgcttgaagcagagcca
tcaagtgctccaagagacttaatcattgatagtgtaggtgatggaactgtggaactctct
tggatagctccaaagtatccaaatggccgaattaacggctatataattcaatatacaaaa
aatagaaaagcagcagagatagaatggtatgtggaggccgtcgttggagccgaaacagaa
gcaactctcaatggtcttgatatggacgcgaaatacttttttaaaatgagtgcacgtaat
aataaaggctatggtccaacgtctcaagtggtcagtttcaaaacacctaaagatcctgct
aaaagctacagtcgagcaaatgaaaatgtatcacccatgatactctacgccattttcgga
gttggagccgggattattattgtactcataattggaggcacacttttggttcgatccaag
ataacagcctctattccgaatgaaaatcgtcataataagaactatatacataacgacgtt
ggtcatgggggtccctcagcaagagagaagttaaatcctcctccacctgatctatggatt
gggcatgatcagctagaacttaaagcaattgatggagatgaaacaggagaaacaaccctg
ggaaggtcgactcctgattatagatctgcgtcttccatggatcgttctagatttaacgga
cctttttctgctgtggtgtcttctcaaaccaatggcagttgtaatggaagtggcacttac
ataagatctcagtattccttagaccctccaagccttcgttccaacaatcccgtcatgtct
ttagagagtcccgatgatttacctcctcctggttatgatccatcattgtgtgcaccctct
gaagactgtccgtcatcgacaatgggggatctaccatggaatcatacaacagcatcctca
tccattgatggaagctctacggcgaatcagagtggatctggagcaattatttcacaatta
ccacccatgtatctcagttctgcaatgtctactacatcgagtgataactcttcatctgtt
agtagtgcaactaggaactctaaatttcctcttaaaagttttcgagctccctcgcctaat
tcatcgcatcaaccaaagaatccattgcgtccaactccttctagtccttttaaacgtccc
ttgattgggtcactcaacatgggtggtttactcaagctaggatccattagtagtgagagt
ccgtcgtcttgttcctcctcatctacaggggcctcctcctcatctaaccaaaattctaat
agtcaatactctactggccacttgccagccatagcagacgtcagatctccagatgtttta
catcctcaaaatggcccctgcgattgtttaagtcatcctatcccgcattcattaagcacg
gaagaactaaacgcggatctcaaaaacttagaaggcttaatgaaggatttatcctcaatg
ggcccaagtaatcaattcaattgttga
DBGET
integrated database retrieval system
