Lepeophtheirus salmonis (salmon louse): 121120039
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Entry
121120039 CDS
T08214
Symbol
Snapin
Name
(RefSeq) SNAPIN protein homolog
KO
K20002
SNARE-associated protein Snapin
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121120039 (Snapin)
Membrane trafficking [BR:
lsm04131
]
SNARE
SNARE associated proteins
Others
121120039 (Snapin)
Endosome - Lysosome transport
Arf GTPases and associated proteins
BLOC-one-related complex (BORC)
121120039 (Snapin)
Others
BLOC-1 complex
121120039 (Snapin)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snapin_Pallidin
Laminin_II
Eisosome1
VPS11_C
PFam54_60
Asd-4
Baculo_PEP_C
DUF16
DUF1664
Aegyptin_C
Prominin
DUF3496
DUF3573
DUF5798
Motif
Other DBs
NCBI-GeneID:
121120039
NCBI-ProteinID:
XP_040570823
LinkDB
All DBs
Position
6:41341817..41342329
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AA seq
142 aa
AA seq
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MSEEERSDPPLLEEDSQSTATSLGEDKSNHFEPTRDTLSEGILSLLRPTLESIDTSVADT
RQAQTELKTQIEKLTADLEEIAKKQDCPVKLETYVDKLHNSKRKVLVVSNILQGAQERLN
RIHQLSMKETAKRRTLLEPSDN
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagaagagaggagtgatccaccactacttgaggaggattctcaaagcacagcc
acctctttaggcgaggacaagtccaaccatttcgaacccacaagagacaccctctcagaa
gggatcctttccttgctcagacccactcttgagtccattgacacctctgtagccgataca
cgacaagctcagacagagctcaagactcaaattgaaaagctcacggcggatttagaggaa
attgccaaaaaacaagactgtccagtcaaattagagacctacgtagataaattacacaat
tccaagcgaaaggtccttgttgtttccaatattcttcagggcgctcaagagcgtttaaat
cgtattcatcaattgtctatgaaggaaacagccaaacgtcgaactttacttgaacccagt
gataattga
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