Lepeophtheirus salmonis (salmon louse): 121120162
Help
Entry
121120162 CDS
T08214
Name
(RefSeq) LOW QUALITY PROTEIN: BLOC-2 complex member HPS3
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121120162
Membrane trafficking [BR:
lsm04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
121120162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
U71
Motif
Other DBs
NCBI-GeneID:
121120162
NCBI-ProteinID:
XP_071745197
LinkDB
All DBs
Position
6:complement(16733519..16737903)
Genome browser
AA seq
1140 aa
AA seq
DB search
MSIPKFNTHNLGLDSRYTSDDNMVRVISVHHFVSEDVTPCCSSLNVASAGVATDLNFLLI
VYQDESPNVEVRRLDIPHSPVSHHFQTIDSVQSILYSTHGQYFLFLEVRNGPESTVVRAY
MNWKDPLVQEASCIPRIAGAVSPCSGADGEAVVLDVIEFGSIKGCPPVVCCVCPSTGNVA
ISYSPNLIVIYQYVTSTNGPGKSYVDFQKIIHIYQSFSPTEISLVEDVLGILSSTEFHLF
KIKIRETTDERKHRSLSVYSFCSDSEFINQGTLGNEYTNQKGGPQFLRLDSHNNITLKRQ
QDSETSQVGHLEGYVGNIVRHKDFKDIDGPDWSNKFFPEVEEANKEYLSLGSPKIMTQVF
GPFTESPESTSIKIIPSLDKLRPDSEFEAECLTLLRCSMLKSEVRHEIFQNLKIIPVYWS
KCKVKNTELSLQSQSQFLHPLQCEFYPHLMSFTVCFTSFNEGYLYHVPGHLRKRGRGCGV
QRIATYPFTAPVRKIALEPSLLHALTETGLETYTLRSGYYTVMEAENISNSKVNACPGGD
IPICLVGLRPFQGALYLELSLDRLVLISKEEIRHTITILKLPSHFDIYKDMIQLAELNKE
SSPHGCSQLLCEAHIVLRTWFHRLSWALLEAGNKREEIVEKITLTKTFLDESSLKLANYH
VSRKEEKEWKLALPYYRLSGKPISFVIDQALKARESVNYLPMGFLHYLTEVLLHPTINEN
VLDSVLTDKIIGILGLMAIDKLAFIVLRSSQFRSFKTKKCTISLKKYLIQSKSIPNAEEV
LAFALLSNNNGGGEESGARELIRSLPNVALSEILIEHHYFLLDMSISNNTPDTFSDLALL
IRDSVPEIFVEVLVSLIKGNAFKLGHILELFVGSFVNRDNSNAVVLQLFLETFFVEFLEN
PTQEDPDILQVLKSLIRSYLSCISTPIRFGDKNIDSDIFGPRDLYLEMLPPFQYGGSRET
LLDAESPEFWCQNSLLKLQSLLCCPILTKNRSQYYEIVLDYLSIYPDTVGAISLKIICSD
NPTAIQALSESHPEVLLTFCKERITEEKDWRFLLETLQEHLSTEPNHPYHEEWYSSVQEI
LNYLAQTLSLDLFMSILPSPMQGNEDYQGYIQMCRKIQQAQQLKGLISNTGQQLLSTLAL
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgagcattccaaagttcaacactcataacctgggcctggactcccgttatacatcggat
gacaacatggttcgagtgatttcagtgcatcacttcgtgtctgaagatgtgactccttgt
tgctcctctttgaatgtggcttctgcaggcgttgcaacggatctcaacttccttctcatt
gtctaccaagatgagtctcccaacgtagaggtgcgacgccttgacattccacactctcca
gtctctcatcactttcaaaccattgattccgttcagagcattctttactcgactcacgga
caatatttcttatttcttgaggtaagaaatggtcctgagtccactgttgttcgagcttat
atgaactggaaggatccacttgtccaagaagcctcttgcatacctcgtattgcaggagca
gtatctccgtgttccggtgcggatggagaagctgttgtgctagatgttattgagtttggc
tccatcaagggatgtcctcctgttgtgtgctgtgtttgtccatccactggaaatgtggct
atctcatatagcccaaatttaattgttatttatcaatatgtgacctccacaaatggtcct
ggaaaaagttatgtggattttcaaaaaatcattcatatctatcaaagtttctccccaaca
gagatttctttggtcgaggatgtattaggtattctctcttccacggagtttcatttattc
aaaataaaaattagagaaacaacagatgaaagaaaacatcgatccctgagtgtctatagc
ttttgttcagactctgaattcatcaatcaaggtactttaggtaatgaatatacaaatcaa
aaaggcggccctcagttcttacgattagattcacacaacaatatcactcttaaaagacaa
caagactcagaaacttcacaagttggccatttggagggttatgtcgggaatattgtgagg
cataaagacttcaaggacattgatggtcccgattggtccaataaattctttcctgaagtg
gaagaagcaaacaaagagtatctcagccttggatcccctaagataatgactcaagtattt
ggtcctttcactgaatccccagaatcaacttcaattaaaataattcctagtttggataag
ttaaggcctgattctgaatttgaagctgagtgtttaactttactacgatgttccatgctt
aaatctgaagttcgacacgaaatctttcaaaatttgaaaatcatcccagtctattggagt
aaatgcaaagtcaaaaatacagagctatcattgcagagtcaatctcaatttctacaccca
ttacaatgtgaattttacccacatttaatgtcctttaccgtctgttttactagttttaat
gagggatacttatatcacgtgcctggacatttgcgtaaacgtggacgaggctgcggcgtt
caaagaatagcaacttatccgtttactgctccagttagaaaaattgctcttgagccgtcc
ctcttgcatgcattgacagagactggcttggaaacgtatacactacgatccggatactac
actgtaatggaagcagaaaacatttcaaattctaaggtgaatgcatgtcctggtggtgat
attcctatctgtttagttggtctccgaccatttcaaggagccctatatttggaattatcc
ttggatcgtcttgttttgatatcaaaggaagaaatccgtcatacgattacaattttgaaa
cttccatcacactttgatatatataaagacatgattcaattggctgaactcaataaggaa
agtagtccccatggatgctcacaacttctatgcgaggcccatattgttcttagaacttgg
tttcatagactatcatgggcgctattagaagccggaaataaaagagaggagattgtggag
aaaataacattaacaaaaacattcctagatgagtcctctctaaaattagccaattaccat
gtatccagaaaagaagaaaaggaatggaaactggctttgccttattataggctatcaggg
aaaccaatatcttttgtcatagatcaagctcttaaagcacgagagtctgttaattatcta
cccatggggttcttacactatctcacagaagtattactccatccaacaatcaatgaaaat
gtattggattctgttttaaccgataaaataatcggcatccttggtttaatggcaattgat
aaactcgcattcatcgttcttagatcatctcaatttcgatcatttaaaacaaaaaaatgt
acgatatctttaaaaaaatatttaattcaatccaagtccattccaaatgctgaggaggtc
ctcgcttttgccctactctcaaacaataatggcggaggcgaggaaagtggggcgcgggaa
ttgattagatccttacctaatgtcgctctttcagaaatactaatagagcatcattatttt
cttttggatatgagtatctctaacaatactccagacacattctctgatttggctttactc
ataagagactctgttcctgaaatatttgttgaggttctcgtgagcttaatcaaggggaat
gcttttaaattaggacatattttagagttatttgtgggtagttttgtaaatcgtgacaac
agtaatgcagttgttctacaattgttcttggaaacgttttttgttgagtttctagaaaac
cctacccaggaagatccggatattttgcaagtactcaaatctttgattcggtcttactta
tcctgtatatccacacctataaggtttggagataaaaatatcgattctgatatatttgga
cctcgtgatttatacttggaaatgcttcccccatttcagtatggaggctcaagggaaact
cttttagatgctgaatccccagagttttggtgtcaaaactctctgcttaaactccagtca
ttactttgttgcccaatattaaccaagaatcgtagtcaatactatgaaattgtcctggat
tacctctcgatatatccagataccgttggagctatctctctaaaaataatctgctcagac
aatccaactgctattcaggctctctcagagagtcatcctgaagttcttttgactttttgt
aaagagaggatcacagaagaaaaggactggcgatttctcctagagacacttcaggaacat
ttaagcactgaaccaaatcacccataccatgaagaatggtactcatctgtgcaagaaata
ttgaattatttagcacaaactctgtcattagatttatttatgagtattttgcctagtccg
atgcaggggaatgaagattatcaaggatatattcaaatgtgtcgaaaaattcaacaagca
caacaattaaaaggccttatatcaaatactggacaacaattactttccactcttgctctt
taa
DBGET
integrated database retrieval system
