Lepeophtheirus salmonis (salmon louse): 121120175
Help
Entry
121120175 CDS
T08214
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04080
Neuroactive ligand-receptor interaction
lsm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121120175
04082 Neuroactive ligand signaling
121120175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsm04040
]
121120175
Ion channels [BR:
lsm04040
]
Ligand-gated channels
Glutamate (ionotropic)
121120175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
121120175
NCBI-ProteinID:
XP_071745794
LinkDB
All DBs
Position
6:complement(53934957..54099594)
Genome browser
AA seq
1016 aa
AA seq
DB search
MRLQLQLAPSLEHQVAAMLSILVRYNWKQFSVVTSEIAGHDDFIQAVRDKVAEMREHFSF
KIQVEVKVTSREEMAIVKHSETRILLLYSTRAEGENIMRWAKEFDLTGNSYVWITTQSVI
GEGREALPEFPAGMLGVNFDTSLEHLVKQIPTAMKVFAHGVEAYLSDPQNKVTDLVPELS
CNMTTSASNELESRWSFGERFHRYLRNVTIKNSEFAKPHIDFLPDGTLKSVELKIMNLRP
GVWSNLVWEEIGVWQSYKKESNGLDIKDIVWPGHSHVPPQGVPEKFDLTVGFLEEPPFIN
LSPPDPITGRCNVDRGVPCRIPNGSSGNATSGASIMKNDTTSQCCSGLCIDLLAKFADDL
QFEYDLIRVEDPKWGILINGKWNGLMSSLVEKKFDMVLTSLKVNGERESVIDFSAPFLES
GTTILVAKRTGIISPTAFLEPFDAASWVLVIFAAVQISALTIFFFEWLSPAGYDMKTSPA
PDHKFSLFRTYWLVWALLFQAPVNMDCPRAFTARFMASVFALFAVVFLAIYTASLATFMI
TREDWDTFSGLDDTRLSNPMSVKPPIKFGTVPHTYTEQALKKHFPEMYEHMKPYNKPNVI
DGVSAVKRGDLDAFVYDGTVLEYLVAQDEDCKLLTVGSWYAMTGYAAAFPRNSKHFQSFN
RKIIEYSENGDLERLRRFWLTGTCNPKKEEKKASEPLAPEQFLSAFLLLLCGIALAAGLM
GLEHVYINYLRGRVVKTDRAGCCALISQSMGKTLTFRGTVYEASQLMKMHRCKDPICDSN
LMRVRHDLDQSRLKLRRLEKELRQRGIQPLSLLDDGTRYLKKSRNGSIFTEKIPRWLKSV
LPVNTPSDSNKFKVVQNQVLMQKCRSNDELMRSKMNSSTSQGTLSSHKLDVLPEYNSTTL
PSSVIPQCRADHLFSLPQKPKQKTKDKDEVVYLSPPPPIPPHRTTSKLRNADSLHDVSTT
NECNNNNNKKLIQERRYVCEKVASPRNSKNSGGTNQKKPTRCKMKSTEISEIETVL
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgcgattacaacttcaattagctccaagtttggaacatcaagtagcagccatgctctct
atattggtgcgctataactggaaacagttttccgtcgttacatctgagattgcaggacat
gatgatttcattcaagccgtccgtgataaagttgcagaaatgagggagcatttcagcttc
aaaattcaagtggaagtgaaggtgacgtcacgtgaggaaatggcgatagtaaagcactca
gagacccgaattctcttactttattccacgcgtgctgagggtgagaatattatgagatgg
gcaaaggaatttgatttaactgggaattcctatgtatggatcacaacacagagtgtcatt
ggtgaagggcgggaggctttaccagagttcccagccgggatgttgggcgtcaattttgat
acttctttggagcatttagtcaaacaaatcccaacggcaatgaaggtatttgctcatgga
gttgaggcctacttatcggatcctcaaaacaaagtaacggatttagtaccagagctctct
tgtaatatgacaacatctgcatctaatgaattagagtctcgatggagttttggagagcga
tttcatcgatatttacgaaatgttacgattaaaaatagcgaatttgcaaaaccacatata
gatttcctgcctgacggtactcttaaatctgttgagctcaaaataatgaatctaagacca
ggagtatggtcaaaccttgtatgggaagagattggtgtatggcaaagctataaaaaagaa
agtaatggtttggatatcaaggatattgtatggccaggtcatagccacgttcctcctcaa
ggtgttccagaaaaatttgatctcacagtgggatttctagaggaacctccattcattaat
ttatctcctccagatcccataacagggagatgcaatgtagacagaggtgttccttgtcgt
ataccaaatggttcgagtggcaacgctacttcaggagcttccattatgaaaaatgataca
actagtcagtgttgttctggtctctgtattgatttgttggctaaatttgcagatgatctg
cagtttgaatatgatttgattcgtgtagaagatccaaaatggggtattttaattaatggt
aaatggaatggcctaatgtcttcgcttgtggaaaagaaatttgatatggtacttacatct
cttaaagtcaatggggaaagagagtccgttattgacttttcagctcccttcttagaatct
ggaacaactattctagtcgctaaaagaactggaataatttctccgacagcttttttagag
ccatttgatgctgcatcttgggttctagtgatatttgctgcagttcaaatatctgcctta
acaatattcttttttgaatggctaagtcctgccggctatgacatgaaaacaagcccagct
ccagaccacaagttttcccttttccgaacctactggctggtttgggctttactctttcaa
gcaccagtgaatatggactgtccaagagcgtttactgctcgatttatggcttcagttttt
gctttatttgctgtcgtatttctcgccatatatactgcttccctggcaacttttatgatc
acaagggaggattgggatactttttcggggctagatgacacacgattgtcaaatcccatg
agtgttaagcctccaataaagtttggtactgttccacacacttacacagagcaagctttg
aagaaacattttcctgaaatgtacgagcatatgaaaccttataataagcctaatgtgatt
gacggggtatctgctgttaagagaggagatttggatgcatttgtatatgacggtacagtg
ctggaatatctcgtagctcaagacgaagattgtaaactactaacagttgggtcttggtat
gctatgactggatatgcagcagcctttccaagaaactcgaaacattttcagtcctttaat
cgaaaaatcatcgaatattcagaaaatggtgacttggagcgtttaagacgtttttggttg
acaggtacatgcaacccaaaaaaggaagaaaaaaaggctagtgaacctcttgctccagaa
caatttctatctgcgttcttgctcttactttgtggaattgcactagctgctggtctgatg
gggcttgagcatgtgtacattaattacctcagaggaagagtagttaaaacagacagagct
ggttgctgtgcattaattagccagagcatgggtaagactttaacgtttcgtggtactgtc
tacgaggcaagtcaacttatgaaaatgcatcgatgtaaagatccaatatgtgatagtaat
ttgatgagagttcgtcatgatttagatcaatctcgattaaaacttcgtcgtctagaaaaa
gagcttagacagcgagggatacaacccttgtctctcctggatgatggcacacgatacctt
aaaaaatcccgaaatggctcaattttcacagaaaagattccaaggtggctaaaatcagtt
cttcctgttaatactccttcagattccaataagttcaaagtagtccagaaccaagtacta
atgcaaaaatgccgatccaatgatgaattaatgagatcaaaaatgaattcatcaacatcc
caagggacattgtcttcgcataaactcgatgtactacccgagtataatagtacaactctt
ccatcaagtgttatcccacaatgtagagctgatcatttattttcattgccacaaaagcca
aaacaaaagacaaaggataaagatgaagtagtttatctctcccctccacctcccattcct
ccccataggacaacaagtaaattaaggaacgcggatagtcttcacgacgtatccaccacc
aacgaatgtaacaacaacaacaataaaaaattaatccaagagcgtagatacgtttgcgaa
aaagttgcgtctcctcgaaattcaaagaacagtggtggaactaaccagaaaaaacctaca
cggtgcaaaatgaagtcaacagagatttcggaaattgaaacggtgctttga
DBGET
integrated database retrieval system
