Lepeophtheirus salmonis (salmon louse): 121120260
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Entry
121120260 CDS
T08214
Symbol
msi
Name
(RefSeq) uncharacterized protein msi isoform X2
KO
K14411
RNA-binding protein Musashi
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121120260 (msi)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121120260 (msi)
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121120260 (msi)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
NID
FYTT
Motif
Other DBs
NCBI-GeneID:
121120260
NCBI-ProteinID:
XP_040571042
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All DBs
Position
6:49295978..49533294
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AA seq
460 aa
AA seq
DB search
MNLVLTSGPPPAQLDAPPHCQPVSMDSNNVEYSSQTGSSGRSTPSSDSSPGKLFVGGLSW
QTTPDKLREYFGQFGSVTDVLVMKDPVTQRSRGFGFITFSTPDAVDRVLAVVTHTLDGKK
IDPKHATPKSKSKANKTKKIFVGGVSQDTSAEEVKAYFNQFGKVEEAVMLMDQQTKRHRG
FGFVTFESEDVVDRVCEIHFHTVKNKKVECKKAQPKEAVQAANAAALLGKRVILTNLGLP
GGGGGGLSLTGSPSLNANTAIQVSQPQMTASLAAQLSAAQSHMAAMGGYGKLLGATPISS
FRYAPYPIPSITGQAAVQAQAQVAAAAAAAALAAQQQQVAASPAGYVHSGNHAPNQPQTQ
QTTQAGGIQSLVHAASHQHQQNHNPSANLPQGPTVSTTAGGPTVSLAGTAGSHASLAAAG
AAIGAAAGHHPYQAFNLANVDMSSFQGVDWSAMYGVGMYV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaacttagtgctgacctcgggaccaccgccagcacaattagatgctccaccgcactgt
caacctgtaagcatggacagtaacaacgtggaatatagctcgcaaactggatcctctggt
cgatccactccctcttcagatagttctcctgggaaactattcgtgggtggactatcttgg
cagaccacacctgataaattaagagagtattttggacagtttggatctgtgacggatgta
cttgttatgaaagatcccgtgacacagagaagtcgtggttttggattcatcaccttctct
actccagacgcagtggatcgggtcctagcagtggtgacccatactcttgatgggaaaaaa
atagaccccaagcatgcaacccccaaatctaaatctaaagcgaataagactaaaaagata
tttgtgggtggtgtgagccaagacacttctgccgaagaggtaaaggcgtatttcaaccaa
tttggtaaagtagaagaggctgttatgttaatggatcaacagacaaagcgacatcgaggc
tttggctttgtgacctttgaaagtgaggacgtcgtggatcgtgtttgtgagattcatttc
catactgttaaaaacaagaaagtagaatgtaaaaaggctcaacccaaggaggctgttcaa
gcagcgaatgcagctgcacttcttggtaaacgtgtcatattaacgaatttaggccttccc
ggaggaggaggcggcgggctttcactcactggttccccatctttaaatgccaacactgca
atacaagtctctcagccccaaatgacagcatctttagccgcccaactctcagctgctcaa
agtcatatggcagcaatggggggctatgggaaacttctcggagccactcccatctcttcc
ttccgatacgctccttatccaattccttctattacgggtcaagctgcagtgcaggctcaa
gctcaagtggcagcagctgctgcagcagcggctcttgcagcacaacaacagcaagttgca
gcctctcctgctggctatgttcattcaggaaatcatgctccaaaccaaccacaaacccaa
cagaccactcaagctggtggtattcagtcattagttcatgcagcatctcaccaacatcag
cagaaccacaatcccagtgcaaatcttcctcaaggtcctaccgtctcaacaacagctggt
ggacctaccgtctcactagcaggaaccgcagggagtcatgcttctctagctgcagctgga
gcagcaattggtgctgcggcagggcatcatccttaccaagcttttaatctagccaatgtg
gatatgtcaagttttcaaggagttgattggtcagccatgtacggagtgggaatgtatgtc
taa
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