Lepeophtheirus salmonis (salmon louse): 121120297
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Entry
121120297 CDS
T08214
Name
(RefSeq) proteasome subunit alpha type-1
KO
K02725
20S proteasome subunit alpha 6 [EC:
3.4.25.1
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121120297
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsm01002
]
121120297
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lsm03051
]
121120297
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsm04147
]
121120297
Enzymes [BR:
lsm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
121120297
Peptidases and inhibitors [BR:
lsm01002
]
Threonine peptidases
Family T1: proteasome family
121120297
Proteasome [BR:
lsm03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
121120297
Exosome [BR:
lsm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121120297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
121120297
NCBI-ProteinID:
XP_040571088
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All DBs
Position
6:complement(12078911..12080122)
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AA seq
267 aa
AA seq
DB search
MFRNQYDSDVTTWSPQGRLFQVEYATEAVKQGSVIVGLKNKDQYAVLVSYSRAPTDLSYP
QKKVMTLDSHVGVAMAGLTADAKSLCRWMRTECNYSQHFKDTPIRINVLMQELGHKMQLC
IQGYNKRPYGVGFLVAGFDDMGPHIYQTCPSANFYECKAMAIGARSQSARTYLERHMDSF
PDCDLDALIKHGLLAARDTLPNEVDLNRKNTSIAIVGKNKKFTVIENDAVDPYLANIEGE
RRGGGGGGAPAVAPVEESGEGGAMDTD
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggaatcaatatgacagtgatgtaacaacctggagcccccaagggcgattgttc
caggtggagtatgcgacggaggctgtgaagcaaggttctgtgattgtgggcctcaagaac
aaggaccaatatgctgttctcgtgtcctactcgagggctccaacggatttgagttatcct
caaaagaaagtaatgacgctggatagtcacgtcggtgtggcgatggcgggactcacggcc
gacgccaaaagtctttgtcggtggatgagaacggaatgcaactactcgcagcacttcaaa
gatactcccattagaatcaacgttttgatgcaggagctgggacataaaatgcagctctgt
attcaaggctacaacaaacgtccctatggagtgggcttcttggtggccggcttcgacgat
atgggacctcatatctaccaaacatgtcccagtgccaacttttacgaatgtaaggccatg
gccattggcgctcgttctcaatccgcccgtacctatcttgagagacacatggattcattc
ccggattgcgatctggatgcgcttattaaacatggcttacttgctgccagagatacactc
cccaacgaagtggacttgaatcgaaaaaatacctcaattgccatcgttggtaaaaataaa
aagttcaccgtcatagagaatgatgctgttgatccttacttggctaacattgaaggtgaa
cgacgtggaggtggaggaggaggtgctcctgctgttgctcctgttgaagaatccggtgaa
gggggagcaatggacacggattaa
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