Lepeophtheirus salmonis (salmon louse): 121120299
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Entry
121120299 CDS
T08214
Symbol
Fen1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03030
DNA replication
lsm03410
Base excision repair
lsm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121120299 (Fen1)
03410 Base excision repair
121120299 (Fen1)
03450 Non-homologous end-joining
121120299 (Fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsm03032
]
121120299 (Fen1)
03400 DNA repair and recombination proteins [BR:
lsm03400
]
121120299 (Fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsm04147
]
121120299 (Fen1)
DNA replication proteins [BR:
lsm03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
121120299 (Fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
121120299 (Fen1)
DNA repair and recombination proteins [BR:
lsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
121120299 (Fen1)
Exosome [BR:
lsm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121120299 (Fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
HHH_2
AcylCoA_dehyd_C
Motif
Other DBs
NCBI-GeneID:
121120299
NCBI-ProteinID:
XP_040571090
LinkDB
All DBs
Position
6:8903209..8904922
Genome browser
AA seq
411 aa
AA seq
DB search
MLTFSIIFGALKLIHAPIKKYPNFLIGARNMGILGLSKLIADVSPEAVKENEIKNYFGRK
VAIDASMSLYQFLIAVRGDGGNQLTNADGETTSHLMGTFYRTIRMVENGIKPVYVFDGKP
PNLKSGELEKRSEKRSEAEAALEKAKELGDTSEIDKQARRLVKVSSVHVEEAKTLLKLMG
VPTVSAPCEAEAQCAELSKGGLVYGVGTEDMDSLTFGTTILLRHLTFSEARKMPIKEFHI
DKVLEGFGLTQEEFIDLCILLGCDYCDKIRGIGPKSAFKLMSEHKSIENLIKNLDSKKYS
IPENWMFAEARKLFVHPEVTPCSEINLKWEKPDEEGLIKFMCEEKGFAEDRIRNGAKKLL
KARQGSTQGRLDGFFKVISTPSPKRKSNEPLSKTTSNKKAKTNGKKGTYKK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgttaactttttctattatttttggcgccttgaaacttattcatgctcctatcaaaaaa
tatcctaatttcttaattggagctcgaaacatgggaattttaggattaagtaagttaatt
gcggatgtttcccctgaagccgtcaaagagaatgaaatcaagaattattttggacgtaaa
gtggccattgatgcttctatgagcctctatcagtttctgatcgctgttcgaggagacggc
gggaatcaattgacgaatgcagacggagagacgacgtcgcatctcatgggtactttttat
cggaccattcgcatggtagaaaatgggatcaagcccgtctatgtttttgatggaaagccg
cccaatctcaagtcgggtgaacttgaaaaacggtcagagaagcgttctgaggcggaagct
gccttagaaaaagcaaaagaattgggagatacctcagaaatcgataaacaggctcgaaga
ctcgtaaaggtatcttccgttcatgtggaagaggctaaaactcttttgaaactcatggga
gtacccactgtatctgctccttgcgaagctgaggcgcaatgtgctgaattatctaaagga
ggcctcgtttacggagttggtacagaagatatggactctcttacttttggtacaaccatc
ctcttacgtcacttgactttttcagaagctcgaaaaatgccaattaaggagtttcatatc
gacaaggttctagaaggatttggattgactcaagaagagttcattgatctatgcatactc
ttaggctgtgattattgtgataaaattcgtggaattggtcccaagagcgcctttaagcta
atgagtgaacataaaagtattgagaatcttattaaaaacctagattctaaaaagtattca
atacctgaaaattggatgtttgccgaagctagaaaactcttcgtgcatccagaggtaaca
ccctgttcagaaattaatttaaaatgggagaaaccagatgaagagggcctgataaagttc
atgtgtgaagaaaagggatttgccgaagatcgaattcgaaacggtgcaaagaaattactc
aaagcgagacaaggctctacacaaggccgattagatggtttttttaaagtaatttcaact
ccaagtcctaaaagaaagtcaaatgaaccactttccaaaacaacatccaacaaaaaagcg
aaaacaaatggaaagaaagggacttataaaaaatga
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