Lepeophtheirus salmonis (salmon louse): 121120333
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Entry
121120333 CDS
T08214
Name
(RefSeq) NACHT and WD repeat domain-containing protein 2
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsm04990
]
121120333
Domain-containing proteins not elsewhere classified [BR:
lsm04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
121120333
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_NWD2_C
WD40_Prp19
AAA_16
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
ATPase_2
nSTAND1
NACHT
APAF1_C
AAA_25
Beta-prop_EML
DUF1801
AAA_22
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
121120333
NCBI-ProteinID:
XP_040571115
LinkDB
All DBs
Position
6:complement(16797592..16803508)
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AA seq
1640 aa
AA seq
DB search
MDEKTVDRIFAGSLVDLPPVSSKIVRIFTSSTFTDMLMERNTLMEYVYPKIKEYCREKHG
LEFQVVDMRWGVRDEMTNEHMTTDLCMTELCNCQRLSMGPNFIYFGAQKYGYRPIPTTIV
SSELAQLREVLVTMGNDVSLLDKWYRTDYNAVPPISILQPIDTHLIHFLNKRVPKLQARD
AGIWWGTLPKMQLMLRKASHTLYVNGKMNHEEMHNYHMAVTEREVINGCLSVLNVKDHVI
IYTRIINNINLQNIKRASAFIDIQDRKVDQEAIKLLAHYRDELLPKKMKDNNGIYKRYNV
EWIGREGLAPETHEEYLNDFINHFYKNVLKLVNRAMRKEDTSAQGKIVTEILQHLHACNN
SVKVFYGRTQELEQLREYITGKSTKPFVLYGAGGSGKTAMLSMAACKSVQEWLQPAKPLL
IVRYLGTTPDSSSLAPLLTSTCQQLSYTFMLPFEMIPDDLVPLTAHMKELLNQATANQPL
LICLDSVDQLVGSQDGNKMSWLPTKLPPHCKIIVSCTKEDNNPALCQDYELLTKMIDEPQ
NFLEVTSLGEELAWKVIKLWMKTAGRDLNNYQWRVVANAVARCSLPIFCKLVFAEICRWK
SYSKPTDTYLAHSVMDSIFLLFEKVETKHGWLLVSHALAYVTAAKSGVSETEVEDLISLD
DKVLDDIYQYHLPPVRRIPPLLWTRVRSDLPGYLSDSEADGVSVINWYHRQFCDAARDRY
FKTEEDTLYFHSMMSDFFLGKWGGGTPKPFKFTEIQKHRFGLKSKDSEADRQVPAMPLVF
YTKDGKISRYNLRKFGELPYHLIRAKQFEDLYSNVLFNYQWLYAKMSTCPLQAVLSDFED
ACSFVEDKDVKREIMLVADSLRLGGAILGQYPDMLAPQLVGRLLSEVENNRNIASLLRQC
DEQGLIQNALVPTYHCMHTPGGPLKYSLEGHQFAIFSFKLTSDSRYIVSVSNKFITWDVS
TSDLARQVHPGVEGLMMELEISPDNRYVSAYTNNNQTILLNTLISEFIIIDNPLGNTETV
QGLCLLDTNLIIYGQYTYVTFDLTGKEICNKKVVIDAPILKMSMISNEEFSIFYWSGEMN
DPSMSLETYKNGKGSKVLQFSNGIAINKDQSRCWVCDCSNGSFDVSGYINKNDKWIKEKS
FSKNKYPLLQIELSQDERIVIGTFMTGFQIWMRFSNESSTLFLPSGVRNISTKMNKSSSC
VLSSNHTYAITGIRKELYIWTVKDAKLVKCLDAHFARIIDIQQLTVGAWNCVITSSIDRT
VKVWNMNYIFEQVHHIDRHELQIDSVSLSTMAGIAIVVTRNCIGIWDILTGKLKSKLADS
ALGAIVTHALVSFDGNYIVSAESGFVIYWNVLEESVIFKEEQKNILQVMFYADEKKCFIV
SKTGTVGEYKALCVSRKFPEGDTLFKFEFPYKQFKSVILTSDSQNFVAYGYDKLKDTLFI
YHADAGEFLHKILVKYPNFKEVTSIVSIPDKGGQVALIDLDKGNIMDVKNKKFMRSIPQW
GGQVSKDGKYGLYAPSRGGLDMLDIRHGNVIKTLIPKIAEGIFNVICKFNETNEYVLYYH
SGRKTLRVFRVSDGVMIANYRVPSDLSSLESTNDGNSVVLGMVDGNLTVLTIADPLKTHI
KEYLKALPSRNGRIKNQLPH
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaaaacagtggatcgtatttttgcaggaagcctagttgatctaccccctgtt
agttcaaaaattgttcgaatattcacatcttctacttttacggacatgttaatggagagg
aatacgcttatggagtatgtttatccaaaaatcaaagaatattgtcgggagaaacacggt
cttgaattccaggtagtagacatgagatggggtgtaagagatgaaatgacaaacgaacac
atgactacagatctttgtatgacagagctctgtaattgtcaacgactctccatgggcccc
aattttatttactttggtgcgcaaaagtatggatatcgtcctattcccacgaccattgtt
tccagcgaattagcgcaattgagagaagttcttgtcaccatgggaaatgacgttagtctt
ctcgataaatggtatcgaacagactacaatgcagttcctccaatttcaattcttcaacct
attgatacgcatttgattcatttcttgaacaaaagggtccctaaattacaagcaagggat
gcgggtatttggtggggaacattacccaaaatgcaacttatgcttcgaaaagcctctcat
actctctatgtgaatggtaagatgaatcacgaggaaatgcacaattatcatatggctgtc
acggaaagagaggtcatcaatggatgcttgagtgtcctcaatgtgaaggatcatgtcatc
atttatactcgaataataaacaatatcaatcttcaaaatatcaagagagcatcagccttt
atcgacattcaggatcgtaaagtggatcaagaggccatcaaactcttggctcactatagg
gacgagctcttaccaaagaaaatgaaagataacaatggtatatacaaaagatataacgta
gaatggataggaagggagggattggccccggaaacgcatgaggaatatctcaatgatttc
atcaatcatttttataagaatgtgctcaaactagttaatcgagccatgaggaaagaagat
acttccgctcaaggaaaaatagtgacagagatcctgcaacacttacatgcatgtaataac
tctgttaaggttttctatggaagaactcaggaattagaacaattgagagaatatataaca
ggaaaatccacaaagccgtttgtactttacggtgctgggggatcaggaaaaacagccatg
ctctccatggcagcctgcaaaagtgtacaagaatggctccagcctgcaaaacccttatta
attgttagatatttaggaacaacgccagattctagctccttagcccctttattaacttca
acttgccagcaactttcctacacattcatgctaccctttgaaatgatcccagatgacctg
gttccactgacagcacatatgaaggaactgttgaatcaagcaacagccaatcagcccttg
ttaatttgtcttgattctgttgatcaactggtaggatcacaagatggcaataaaatgtcc
tggttaccaaccaaattaccaccccattgtaaaataattgtttcatgtactaaagaggat
aacaatccagcgctctgccaagactatgaattattaactaaaatgattgatgaaccgcaa
aatttcttggaagttacttcactaggagaggaattggcatggaaagttataaaattatgg
atgaaaacagctggaagagatttaaacaactatcaatggagagttgttgcaaatgctgta
gcacggtgctccttacctatattctgtaaacttgtatttgctgaaatttgtcgttggaag
agttattctaagccaacggatacttatttggctcatagtgttatggattccattttctta
ctctttgaaaaggttgaaacaaagcatggttggctcttagtatcacatgctttagcatat
gtaactgcagctaaatctggtgtgtctgaaacagaggttgaggatctcatatccttggat
gataaagtacttgatgatatttaccagtaccatttaccccctgtaagaagaatccctcca
cttttgtggaccagagtcagaagtgatttacccggatatttatctgactcagaagcagat
ggagtgagtgtaattaattggtaccatagacaattttgtgatgcagcaagggaccgctat
tttaaaacagaggaagatactctttactttcattctatgatgtccgatttcttccttgga
aaatggggtggtggcactcccaagccattcaagtttacagaaattcaaaaacatcgcttt
ggcttaaaatccaaggattctgaagcggatcgacaagttccagccatgccacttgttttt
tatacaaaagatggtaaaatttctaggtataatttgagaaaatttggagaattaccctat
catctcatacgagctaagcaatttgaagatttatattcaaatgttttattcaattatcaa
tggttatatgctaagatgtcaacttgtccacttcaagctgtactcagtgattttgaagat
gcttgttcattcgttgaggataaggatgtaaaaagagaaatcatgttggtcgctgactca
ttaagacttggtggagctattttgggacaatatccagatatgttagcccctcaactcgta
ggtcgcttactcagtgaggtggaaaataacagaaatattgctagtcttttacgccaatgt
gatgaacaaggactgatacaaaatgctttggttcctacataccattgcatgcatactcca
ggaggacctctcaaatattcgttagagggccatcagtttgccatttttagctttaagctt
acatcggactcacgctatattgtaagtgtttcgaataagtttataacgtgggacgtatct
acgagtgacttggcaagacaagttcaccctggagttgaaggtcttatgatggaattggaa
ataagtcctgataatagatatgtatccgcttataccaacaataatcaaacaatcttgctt
aacactcttatttcggaatttataataattgataatcctctgggaaatactgagacagta
cagggactctgtttactagatacaaatctcatcatttatggacagtatacctatgtgact
tttgatctaacaggaaaagaaatttgtaataaaaaagttgtaattgatgcgccaatactc
aagatgtcaatgatttcaaatgaagaattttcaatattttattggtctggggaaatgaac
gacccttcaatgtcattagaaacttataagaatggaaaaggaagcaaggttcttcagttt
tcaaatggaattgcaattaacaaagaccaatcacgttgttgggtctgcgactgctcaaat
ggctcgttcgatgtttcaggttatataaacaaaaacgataaatggattaaagaaaaatct
ttttcaaagaataagtatcctttacttcaaatagagttgtcacaagacgagaggattgtg
attggaacatttatgactggatttcaaatttggatgagattttcgaatgagtcttcgacc
ttatttctaccctctggagttcgaaatatatcaacaaaaatgaacaaatccagttcatgt
gtcctatcatccaatcatacctatgctataacgggtataagaaaagagctttatatttgg
acagtcaaggatgcaaaattagtcaagtgccttgatgctcattttgcacgaatcatagat
atccagcaactaacagttggagcatggaattgtgttatcacttcatccatagatagaact
gtgaaagtatggaatatgaattacatatttgagcaggttcatcacatagatcgtcatgag
cttcaaattgattcagtaagcttaagcaccatggccggcatagctattgtcgtaacacgt
aattgtattggaatttgggatatacttacagggaaattaaagagtaaacttgcagactct
gcattaggagctattgtgacacatgcactagtttccttcgatggaaattacatagtgtca
gcagagtctggttttgtcatttattggaatgttttggaggaatccgtgatttttaaagag
gaacaaaaaaatatattgcaggttatgttctatgctgatgaaaaaaaatgttttattgtt
tccaaaactggtacagttggagaatacaaggcactctgtgtttctcgaaagtttcccgaa
ggagataccttatttaaatttgaatttccgtacaagcaattcaaaagtgtcattttaact
tcagattctcagaatttcgttgcttatggctatgacaaattaaaggataccctctttatt
taccatgcagatgccggagaatttctccacaaaatcctcgtaaaatatcccaatttcaag
gaagtcacaagtattgtgtccattccagataaaggaggccaagtggctcttattgatctg
gataaaggtaacatcatggatgtaaagaacaaaaaatttatgaggtcaattccacaatgg
ggaggccaggttagcaaggatggaaagtatggactgtatgctccatctagaggaggactt
gacatgctggatatccgccatggaaacgtgattaaaactcttattccaaaaatagctgaa
gggatatttaacgtcatttgtaagtttaacgaaacaaatgagtatgtgttatattatcac
agtggacgaaagacccttcgtgtttttcgtgtctccgatggagtcatgatcgcaaattat
agagtaccttctgatttgagttccctggagagtactaatgatggaaatagcgtagttttg
ggaatggtagatgggaatctaaccgttctaacaattgctgatccccttaaaacacacata
aaagagtatttaaaggctttgccttctagaaatggaaggattaaaaatcaacttccacat
tag
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integrated database retrieval system
