Lepeophtheirus salmonis (salmon louse): 121120474
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Entry
121120474 CDS
T08214
Name
(RefSeq) LOW QUALITY PROTEIN: neurobeachin-like protein 1
KO
K23286
neurobeachin-like protein 1/2
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121120474
Membrane trafficking [BR:
lsm04131
]
Endosome - Lysosome transport
Others
Others
121120474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beach
DUF4800
NBCH_WD40
DUF4704
PH_BEACH
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Lactonase
DUF1088
Motif
Other DBs
NCBI-GeneID:
121120474
NCBI-ProteinID:
XP_040571294
LinkDB
All DBs
Position
6:complement(36748035..36757006)
Genome browser
AA seq
2660 aa
AA seq
DB search
MAEEGFIRLESTFKIDPELMDDIWLQYTSTNEEKYFRKFIHQFVSSWEKRISPTWEMLIT
SKLEGYRESGPNLTSLPDELLAALSKFLFISKESQSNDGLMSLNVVSDTKDIIKCLTILC
RCTENIPLIASMDFVKYLTDMNSNFLQNCLQVESSFFHSKVKKQGKEDIVFQIRTETINL
IVESCHFFESLYDPGFCWRAYICGKEGKAEEFATSTALHQEVVPFLYESFETALVDRFPT
LAKEMLNVFGAIISGGRHNAIRAISPATSKMLLKTIRDSETGDDIHIVAIYCSTQSITIM
EQTPPHERQIDLSVLINQYQQVLVSLSEKGQNLSTMIEGISLLTRMLSGSSIELKKYFVR
NGIIETLLSVTSQCLLNDDLKKVLMPVVINRISLILSGCDIACQKMMKIQGYSMLFNIIS
GLGPPDTNILHSILYMATHGKELSDNIQNVKPLVYLLRWITETDYENGAQQVWLCQAIRV
LCTSNIQNKALCCDSGIILEIIHTLKCFDRLEHKSASELLKLLESLGKYSISPYELKQLI
SMLNDDDPSTPDSQKGKFPYKSHIIHVISSMAKGDGYSVCRQYLDFNTSQGIQVPSISQC
PILSNGFTFHCWIRLEQNRSCEKSRRILYSFQTKQGQGFEAFIHQGKLVVVSAHKEEFLG
VPMDSQIFNDDQWHSLSVCHGYARSPFKSSSLVVYVDGSKRLECSLKYPVFSINDPILYC
SIGASLDLKKGIENLSSFSKPSIKDGIIDAIKIGLPGVINLPHRSNDPHVKWTLIGLEDD
FWGKSAPLFGQLGSIHVFNEAITLSQVKFLHLIGPISPMTYLFDQEKVHNDVLSDLESKI
IFCFSPKARLHDKLIDLHKGLYDGNISPKILTHTTHDLRNVINCLGGVQVLFPLLESVNM
KHQDKEEIDELSYLSLLDTESNNENQPQRMQFDRKMSHDGNWELIPSSSFSDWKLEQNPI
SGFLTLIRNLVFDHIVNLEQLNRGGGVGIIGALIQKADSSLIDVNVLMACQLLVEMATCS
QNPKLLSAVHQSILFDFKIWSKSEFTVQIGHIQYLRNTIKSDRKFFRKRFGVQFFMDSIR
RFYGIQNSTVLSVEDTQTVRKALFGIIKMYLVKDGKDITPLIHYLIASLIETSNEVQLSS
EVIETILDIMSDSSVPSSSKDQMYRIFKDENRYKYLFCALMKNPSKELGQCRESILKITL
MILKYRQKKSLKLFLDGAILGYYYYRFTENINVDNREVLILLDIVLFGSSVPDTLSIVGL
LNHIIYFPLIVKLVVAKKILKLLNEQPEVLYKLASTRGWQGGISCLLVKEQNIYVKSSEV
QQNKVSIPSVESAMKDNLHKGSLSSHSLKERTVKKVTDNVGYLLDKVSSMTYQESEHRIW
EYETLNVDEFDGLMEPSEMISRSSSSEDLSSAQPSCATNDSIVDDNSSYVILDDEDETNE
DVLGALVVDILHKIMWEVWGGKIEDIVSERGQVLASINMLGLNNELYKSVVDVKRDILER
FILTLSNSNEFNPDVVKHIVCWTYDWIVNDNYGVGVKKITKELVEGISRLTHMFVDSMEI
EHKCSNEVIKMTLEVMLKCAEIDYFCQLSSKKLVDLIQSMKPYTSEVLGFLIFRISAIIS
DKLKNDDSPDDYDPLVNVLKTVLDESKDKLNLTLELPTLTNIGEAFKDTFKSYIFNEEWK
YFIEKKMVHLKITYESGYLETLPNKMDEFWAESFESNKLTSDTWNASIEESKKYLIINYL
EPIEELIRTENQRYHNHISQHKSRLAFVHKRWKVSKRLFFGPRGAWYNQSKAIISDNWKL
SSNENYLRMRIKLVPNLNFNPHYQASGQRDNVPIKNIKSGNQEIFKLGEKLKEATEETEK
KDISEEFLTEEDLKMIAREQLETDDDKKSGQQKERLFVSEDCELVTFMSVIKGKFELTSS
YIYFFDTTLNGVGDDDSEWTEERKDLRISLIDIHELHLRRFNLRKSGMEIFLIDHTNHFF
NFPINRKRNKVYSRILSLCHSNVIYSRASPMDTFKESALMSKWINREISNFEYLMHLNTL
AGRSFNDLSQYPVFPWILADYSSSKLDLSNPSTFRDLSKPIGIQNPKHVDEVNNRYDSFE
DPSGVISKFHYGTHYSNSAMVLHYLVRVEPFTSLHIDLQSGRFDVADRQFHSIPQSWKSL
YSNVNDVKELIPEFFYFPEFLINSNCFDLGVLQGSKKVRVNDTVLPPWASDPWDFIKKHR
EALESDYVSMNLHHWIDLIFGYKQTGKKAVEAMNVFYYCTYEGAVNLDRIMDHAEREALE
GMINNFGQTPCQLLKDPHPRRMTSGEISSKNEAMTSTRTNILNRTHCWKSYSINISTDKD
PVTFVVIPKLDCFNNKSILNSLSSSSSTTTMVSVTRSAKVNYHSWQFDKKASFLFERDTS
ELSEIRNIPGPFNTKLSQSHLVVTYDGKFLFCGGHWDNSIIIYNIAKSKVLMRVIKHDDI
VTCLSLDPRVGRFMISGSRDTTSIVWQIGSKGLIPLQVLSGHDKAVTCVAIIFELDIAVS
GSEDGSVNVYTVKEGQYIRTIYPPVMTDDPFTISLIQLSYQGDIIFSGHCSETHSLHVFT
VNGHYIQSITSDHRITALLSSDDLLLSGDENGNLILRGLYNLEIIKELPLLLPISGVSLT
SDNSHILVPLRDGKLIVIAG
NT seq
7983 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaagggtttatccgactggaatccacgtttaagatcgaccctgaacttatg
gatgatatatggcttcaatacacgagtaccaatgaggaaaagtacttcagaaaattcatt
catcaatttgtttcctcatgggagaaaagaattagtcctacatgggagatgctcataaca
tccaaattagagggctatcgagagtctgggcccaatctaacaagtctacctgatgagctc
ctagcggctttaagcaagttcttattcataagcaaagaaagtcagagtaatgatggactg
atgagtttaaatgttgtgtcagatactaaagatatcatcaagtgcctgaccattttgtgt
agatgcaccgagaacattccgctcattgcttcaatggattttgtcaaatatttaacggat
atgaactccaattttcttcaaaactgtttgcaagttgaatccagtttttttcattcaaag
gtcaagaagcaaggtaaagaagacatcgtgtttcagataagaacagagactatcaacttg
attgttgagagctgccatttttttgagtctctgtatgatcctggcttctgttggagagcg
tatatatgtggaaaagaaggtaaagctgaagagtttgcaacttcaactgctcttcaccaa
gaggttgttccttttttgtatgagtctttcgaaactgcattggttgatcgttttcctaca
ctagccaaagaaatgttaaacgtatttggcgctattatttctggaggtagacacaatgct
attagagcaatttcgccggcaacctcaaaaatgttacttaaaacaattcgagattcggaa
acaggggatgatatacatatagttgcaatttattgttccacacaatccataactattatg
gagcaaactcctcctcatgaaagacaaatagacttatctgtgctcatcaatcaatatcaa
caagttctagtcagtttgagtgaaaagggacaaaatctatcgaccatgattgaagggatc
tctcttttaactcgtatgttgtcaggatcctctatagagttgaaaaagtattttgttaga
aatggtattattgagactttgctctcagttacaagtcaatgtcttcttaatgatgatttg
aaaaaggtacttatgcctgttgtgatcaatcgaataagtttaatactctctggttgtgat
attgcttgtcagaaaatgatgaagattcaaggatattcaatgttattcaatataattagt
ggtttgggtcctcctgacacaaacatcttacattctattttatacatggccactcatggg
aaggagttaagtgataatatacaaaacgttaagcctctcgtgtacttgctacgttggatc
actgagactgattatgaaaatggggcacaacaggtatggctttgtcaagccattagggtc
ttgtgtacatccaatatacaaaacaaggcattatgttgtgattctggaatcattttagaa
ataattcatactctcaaatgttttgacagactagaacataaaagtgcatccgagctttta
aaacttttggaatccctaggaaaatattcgatttcaccgtacgaactgaagcaacttata
agtatgcttaatgacgatgatccctctactccggattcacagaaaggaaaattcccttat
aagagtcatattatccatgtcatcagttcaatggcaaaaggggatgggtactcagtgtgc
cgccaatatctggacttcaatacaagtcaagggattcaagtacctagtataagtcaatgt
ccaattctttcaaatggatttacttttcattgctggattcgccttgagcaaaatcgttct
tgcgaaaaatctcgcagaatactatattcatttcaaacaaaacaaggacagggctttgag
gcctttattcatcaggggaaacttgtggttgtctctgcccataaagaagagttcttaggt
gtacctatggatagtcaaattttcaacgacgatcaatggcattctttatctgtatgccat
ggatatgcaagaagtccttttaaatcaagctcccttgtcgtatatgtggatggttccaag
agattggaatgttccttgaagtatcctgttttttcaattaatgatccaatattatattgt
agcattggagcttctcttgatttaaagaaaggaattgaaaacttgtcgtcattttctaag
cctagtattaaggatggaattattgacgcaatcaaaattggattacctggtgttattaat
ttacctcacagatccaatgacccccatgtaaagtggactttaattggattagaagatgat
ttttggggtaaatccgcccctttatttggacaattgggaagtatacatgtgttcaatgaa
gctattacattgtctcaagtaaagttcttgcatttgattggtcccatatctccaatgact
tacttatttgatcaagaaaaagtacataatgatgtattaagtgatttagagagcaaaatc
attttttgtttctccccaaaagcacgtctacatgataaattgattgatttgcataaagga
ctgtatgatggaaatatttctcccaaaatactaactcacactacgcatgacttacgaaat
gtaattaattgcctcggtggagtccaagtactctttcctcttttagaatctgtcaatatg
aaacatcaggataaggaagaaatcgacgaacttagttatttaagtttattagatactgaa
agcaataatgagaatcaaccacagaggatgcagttcgatagaaagatgtcacatgatgga
aattgggaattaattccctcaagttcattttcagattggaaattggaacaaaatccaatt
tccggatttttaaccttaataaggaatttagtgtttgatcatattgttaatttagaacaa
ctgaatagagggggtggtgttggcattatcggtgctctaattcaaaaagcggactcttct
ctaattgacgttaatgttttgatggcttgccaattactagttgaaatggctacatgttct
caaaatcctaagttgttgtcggctgttcatcaaagtattttatttgattttaaaatatgg
tccaagtctgagtttactgtccaaattggacatattcaatatcttagaaatactataaaa
tctgatcgaaaatttttccgaaaaagatttggagttcaattttttatggactcgatacgt
cgattttatggcattcaaaactctactgtactttcggttgaggatactcaaactgttagg
aaggcactttttggtattataaaaatgtatttagtaaaagatgggaaggacataactcct
ctcattcattaccttattgcttcacttattgaaacatctaatgaagtgcaattatcctct
gaagtaattgagacgatccttgatattatgtcagattcatcagttccatcttcctctaaa
gatcaaatgtatcgtatatttaaagatgaaaaccgatacaaatacttattttgtgctcta
atgaagaatccttccaaggaattggggcaatgcagagagtctattcttaagataactctt
atgattctgaaatatagacagaaaaaatcactgaaactatttctagatggggcaatactt
ggttattactactatcgttttactgaaaatataaatgtcgataatagagaggttcttatt
cttttagatatagtcctatttggttcctcagtgcctgatactctatcaatagtaggactt
ttaaatcacatcatttacttccctctcatagtaaagttggtagttgctaaaaagatcttg
aaattattaaacgaacagcctgaagtgttgtataaattagcatcaacccgaggttggcag
ggtggtatatcctgtttgttggttaaagagcaaaatatctatgttaaaagttccgaggtt
cagcaaaataaagtttcgataccctctgtagaatcagctatgaaagataatcttcacaag
ggtagtctttcgtctcatagcctcaaagaaagaaccgttaaaaaagtgactgacaatgtt
ggttatttattagacaaagtcagttcaatgacttatcaagagtctgagcaccgtatctgg
gaatatgaaactcttaatgtagatgaattcgatggtctaatggaacctagcgaaatgata
tccaggtcgagttcttcagaggacttgtcttctgctcaaccatcttgtgcgacaaatgat
tctattgttgatgataactcctcctacgttattctcgatgatgaagatgaaacaaatgaa
gatgttttaggcgcattggtcgttgatattttgcataagataatgtgggaagtttggggg
ggaaagattgaagatattgtaagcgaaaggggtcaagttctggcttctattaacatgttg
ggtttgaacaatgagctctataaatctgttgttgatgttaaaagagatattttggagaga
tttattcttacgctatcaaatagcaatgaatttaatccagatgtagtcaaacacattgta
tgttggacttatgattggattgtgaatgacaattatggagttggggtaaaaaaaatcaca
aaggagcttgttgaaggaatttcacgacttactcatatgtttgttgattcaatggaaata
gaacataaatgtagcaatgaagtgataaaaatgactttagaagttatgttgaagtgtgct
gaaattgattatttttgtcaattgtcatctaaaaaacttgttgacttaattcaaagcatg
aaaccatatacttctgaagtccttgggtttttaatttttcgaatatccgcaattatttca
gataaattgaaaaatgatgattcccctgatgattatgatcctctcgtgaatgtactgaag
actgtactagatgagtcgaaagataaattgaatttgactcttgagcttcctacactcact
aatataggggaagcttttaaggatacatttaagagctacatatttaatgaagaatggaag
tacttcatagagaagaaaatggttcacttgaagataacctacgagtctggatacttagaa
actcttcccaacaaaatggatgaattttgggccgaatcctttgaaagcaataaattgaca
tcagacacatggaatgcgagtattgaagagtccaaaaagtatttgattataaactatctg
gagccaattgaagaactaatacgtactgaaaatcaaagatatcacaatcacataagtcaa
cacaaatcgcgcttagcctttgtacataagcggtggaaagtttcaaaaaggcttttcttt
ggacctcgtggagcttggtacaaccaatcaaaagctataataagtgataattggaaacta
agctcgaatgaaaattatcttcgaatgcgaataaaactcgttccaaatcttaatttcaat
ccccactaccaagcttcgggtcaaagagataatgtacctattaaaaatataaaatcagga
aatcaggaaatattcaaacttggagaaaaattgaaggaagctactgaagaaacagagaaa
aaggatatatctgaagaatttcttactgaagaagatttaaaaatgattgccagagaacaa
ttagaaactgatgatgacaagaagtcgggccaacagaaggaaaggcttttcgtgagcgaa
gactgtgagctcgttacttttatgtcagtgattaaaggcaaatttgaattaacctcaagc
tatatatactttttcgatactaccttaaatggagtcggggacgatgacagtgaatggacg
gaagaaaggaaagatttaagaataagtctaatagatatacatgaactccatttacggaga
tttaatttgagaaaatctggaatggaaatattcttgattgatcatacaaatcacttcttc
aattttcctattaatcgcaaaagaaataaagtatattcacgtatactaagtttatgtcat
tccaatgtaatttatagtcgtgcttcccccatggatacatttaaagaatccgcgttaatg
tccaaatggattaatagagaaatttcaaatttcgaatacctcatgcatctaaatacttta
gcaggaagaagttttaatgatttgagccagtatccagttttcccgtggatattagcggac
tattctagttccaagttagatctttccaatccttcaacatttagagatctctcaaagccc
attggaattcaaaatccaaaacatgtagatgaagttaataatcgttatgacagctttgaa
gatccttcaggagtaatttcaaagtttcattatggtacacactactccaattctgcaatg
gtcctacattacctggttcgtgtggagccattcacatctctccatattgatcttcaaagt
ggtcgctttgatgttgcagatcgacaatttcattcaattccgcaaagttggaaatctttg
tattcgaatgtaaacgacgtcaaggaactaattcctgaatttttttatttcccggagttt
ctaatcaactcaaattgttttgatcttggtgttcttcaaggctctaaaaaagtgcgtgta
aatgacactgtactacctccttgggcatctgatccctgggactttattaaaaagcatagg
gaggcattagaatcggactatgtttcaatgaatcttcatcattggatagacttaattttt
ggatacaagcaaactggaaagaaggcagtagaggcaatgaatgtattttactattgtacc
tatgaaggagctgtaaaccttgatcgaattatggatcatgcagagagagaagctcttgaa
ggaatgatcaacaattttggtcaaaccccttgtcaattactcaaggatcctcatccccga
aggatgacatctggtgaaatatcatctaaaaatgaggcgatgacttctactagaacaaat
atactgaatcgaactcattgttggaagtcatattcaatcaatatatctacggataaggat
cctgttacatttgttgttattcctaaattagattgtttcaacaacaagtccattttaaat
tccctttcatctagttctagtacaacaacaatggtatctgtgactcgatccgctaaagtg
aattatcacagttggcagtttgataagaaagcgtcatttctcttcgaaagggatacgtca
gaattatctgagattcggaatatacctggtcctttcaacacaaagttgagccaaagtcat
ttggttgttacgtatgatggaaaattcctcttttgtggtggccattgggacaatagtata
attatatataatatagctaaatccaaagtacttatgagagttattaaacacgatgatatt
gtaacatgtttgagcttggatcctcgtgttggtcgatttatgattagtggatcgagggat
acaacttccattgtttggcaaattggaagcaagggtctcatacccctacaggtcctctcc
ggtcatgataaggctgttacgtgtgttgccattatttttgaattagatattgctgtatct
ggttctgaagatggttctgtgaatgtttatactgtgaaggaagggcaatacatacgaact
atttatccccctgtaatgacggatgatcccttcactatttcccttattcaactttcttat
caaggagatattatattttctggccactgctccgaaacccactccttacatgtttttact
gtaaatggacactatatacaatctattacttcggatcatcgaatcactgccctcctttcc
tcagatgaccttttactttccggagatgaaaatggaaacttaattttaagaggtctgtac
aatttggagataatcaaagaattacctcttctccttcctatttctggagtttcactgaca
tctgataattcacatattctcgttccactaagagatggaaaacttattgtaattgctggc
taa
DBGET
integrated database retrieval system
