Lepeophtheirus salmonis (salmon louse): 121120610
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Entry
121120610 CDS
T08214
Symbol
Syx5
Name
(RefSeq) syntaxin-5
KO
K08490
syntaxin 5
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121120610 (Syx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121120610 (Syx5)
Membrane trafficking [BR:
lsm04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
121120610 (Syx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
ATG17_like
Use1
Syntaxin-5_N
BLOC1_2
DUF87
Motif
Other DBs
NCBI-GeneID:
121120610
NCBI-ProteinID:
XP_040571420
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All DBs
Position
6:41098204..41099906
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AA seq
340 aa
AA seq
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MLGAVEGLRRRHGSESESQSTFIVTHSQVSPSSPFSGSVKMSLMGATDRTDEFRSILRSM
RDKRMMPPNSNIRNKHPQDLIHSSREFMKIAGQIGRDIGGTYAKLEKLSLLAKRKTIFDD
NPADVQELTYVIKDDMNALNKQISQLQMIAKAGPQGNRYGPQVASHSKGVVVSLQSKLAN
MTSDFKKILRVRTENLKESKTRQEKFSYNTPQPTLNGSVLADEEDNKAATSFAIDMLQSD
SQQLMKPHNHLQSRAEAMENIESTIVELGGIFNQLAHMIKEQEEVMVRIDSNIDETGLNV
EAGHGEILKYFQSVTSNRWLMIKIFGVLIFFFIFFILFMA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcttggagctgttgagggattgagaagacgtcacggctccgaatcagagtcccaatcc
acttttattgtcacccattctcaagtttctccatcatctccattctcaggatctgtcaaa
atgtctctcatgggagcgacggatcggactgatgaatttcggagtattttacgatctatg
agggacaaacgaatgatgcctccaaattccaatatacgaaataaacaccctcaggacctg
attcactcttctcgtgaattcatgaagattgcaggtcaaatagggagggatattggagga
acatatgcaaagcttgagaaattaagtcttttagcaaagcgaaaaactatttttgatgat
aatcccgcggatgtccaggaactaacttatgttataaaagacgacatgaacgccttgaat
aaacaaataagtcaacttcaaatgattgcaaaggctggacctcaaggtaatcgctatgga
cctcaagttgcttctcatagcaaaggagtggttgtttctttacaatcgaaattggctaac
atgacatcagatttcaaaaaaatattacgtgttaggacagaaaacctcaaggaatctaaa
acacgccaagaaaagttttcctacaatacccctcaaccaacattaaatgggtctgtatta
gcagatgaagaggataataaagcagcgacatccttcgcgattgatatgctccaatccgat
tctcagcaattaatgaaaccccacaatcatctacagtctcgagctgaggcaatggagaat
attgaatcaactatagttgaattgggtggtatttttaaccaattggctcatatgatcaag
gaacaagaagaagttatggttcgtatagatagtaatatagatgagactgggttaaatgtt
gaagcgggtcatggtgagatccttaaatattttcaaagcgtcacctccaatcgatggtta
atgattaaaatatttggagttttgattttcttttttatattttttatcctttttatggcc
tag
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integrated database retrieval system
