Lepeophtheirus salmonis (salmon louse): 121120613
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Entry
121120613 CDS
T08214
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsm03016
]
121120613
Enzymes [BR:
lsm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
121120613
Transfer RNA biogenesis [BR:
lsm03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
121120613
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
DUF1450
Motif
Other DBs
NCBI-GeneID:
121120613
NCBI-ProteinID:
XP_071745255
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Position
1:21946583..21949196
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AA seq
546 aa
AA seq
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MIRVGDEEVEDIEDILSGGPIVRRTLNIGPRLSKSLQATNDDDELQQEKELNSFVPGTTN
VYIKTWGCAHNNSDRNYMAGLLSAQGYNISFEDKESAEVWILNSCTVKNPAEDHFRNEVD
GGLKDGKKVIVAGCVPQGKPGSEYLKGLSVIGVQQIDRVVEVLEETLKGNSVRLLGSKKV
NAKKAGGASLALPKIRKNPLIEIIAINTGCLNQCTYCKTKHARGELGSYPPEEIVARAQS
CFEEEGVVEIWLTSEDTGAYGRDIGTTLPELLWKLTEVIPKGCRLRLGMTNPPYIMDHLD
EMAKVLSHPRVYKFLHVPVQSGADAVLKDMKREYTVDDFSKVVNVLKNKVPGITIATDII
AGFPTETDDDFKETMILCKKYKFPSLFINQFFPRPGTPAAKMKRVATTKEVKKRTKELSD
YFQSYEPYKNRIGKKYSSVLVTETSHDGNYLVGHNEFYEQILVPKDDVLLGKCVDIEITS
VSKFSMMGKLVSEPVLANDTPLKSAEVEAPKSYKGSLIYKLSLGILFLAVCVRILQLFSC
ALSKNK
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgatccgtgtcggagatgaggaggttgaagacattgaggacattctatctggtggacca
atagttcgtcgtacacttaacattggacctcgactcagtaaatctcttcaggcaacgaat
gacgatgatgaacttcaacaagagaaggagttgaactcctttgttcctgggactacgaat
gtttatatcaagacttggggatgtgctcacaataattccgacaggaattatatggctggc
ctcctctcagctcagggctataatatatcatttgaagataaggaaagtgccgaagtgtgg
atactaaactcttgtaccgtcaaaaatcctgcagaggatcattttcgtaacgaagtagac
ggaggactcaaagatgggaaaaaagtcattgttgctgggtgtgtacctcaaggaaagcca
ggatcggaatatttaaaaggactctcagtcattggagtccagcaaatcgatcgagtcgtt
gaagtccttgaggaaacgttaaaaggaaactctgtgagattattaggttctaaaaaagtc
aacgcaaaaaaggctggcggtgcttcacttgccctacccaaaatacgtaaaaaccctctc
atagaaatcatagcaatcaatactggatgcttgaatcagtgtacctactgtaaaacaaaa
catgctcgaggagaacttggctcttatccacccgaagaaattgtggctagagctcagtca
tgttttgaagaggagggagttgtggaaatatggcttacctcagaggatacaggtgcttat
ggtcgtgatataggtacaactttgcctgaattattgtggaaactgactgaggtgatcccc
aagggatgccgacttcgtcttggaatgactaatcctccctatatcatggatcatctggat
gaaatggctaaagttctcagtcatccgcgcgtctataaatttctacatgtgcctgttcaa
tccggtgccgatgcagttctcaaagatatgaaaagggaatatactgtggatgattttagc
aaagtggtcaatgtattgaagaacaaggttcctggtattacgattgccactgatatcatt
gctggatttcctactgaaacggatgatgactttaaagaaaccatgattctctgtaaaaaa
tacaaattcccaagcttgtttatcaatcaattctttcctcgacctggtactccagctgct
aaaatgaagagagttgctacaacaaaggaagttaaaaaacgaactaaagaattgagtgat
tactttcaatcctatgaaccctacaaaaatcgaattgggaaaaagtattcatcagtcctt
gtaactgagacctctcacgacggtaactacttagtgggacacaacgagttctatgagcaa
attcttgtgccaaaggacgatgttctactcggaaagtgcgtggatattgagattactagc
gtttcaaagtttagtatgatgggtaaacttgtgtccgaacctgttttagcaaatgataca
cccttgaagtctgctgaagtggaagctccaaaatcatataaaggatccttgatctataaa
ctcagtcttgggattttgtttcttgctgtatgtgttagaatattacagttgttctcatgt
gctttgagtaaaaataaatga
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