Lepeophtheirus salmonis (salmon louse): 121120630
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Entry
121120630 CDS
T08214
Symbol
snRNP-U1-70K
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121120630 (snRNP-U1-70K)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsm03041
]
121120630 (snRNP-U1-70K)
Spliceosome [BR:
lsm03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
121120630 (snRNP-U1-70K)
Complex B
121120630 (snRNP-U1-70K)
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Paralog
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
121120630
NCBI-ProteinID:
XP_040571436
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All DBs
Position
6:1583690..1588252
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AA seq
367 aa
AA seq
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MTQFLPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRV
EMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLR
REFESYGVIKMIVLPKDSEDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERA
RTVKGWLPRRLGGGLGGTRRGGPEVNILHSGREDGGGARERGGRERRSKSRERRSRSRDR
RRDRRRSRSRDRKRVRKSRSPSRRRSRSRDRTDRKRRRTRSKERKRERDRRGDRRGGGGG
AGSGGAGPEEDFGNRVKTEWDESILVKQEPRDDYDEYHNEYSEVKQEPMDEMDRKPLLNE
GYEEGQY
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgactcagtttttacccccgaatttgttggcccttttcgctcctcgcgagccgatcccg
taccttccgccagcggacaaattaccccacgaaaagaaagtaacacacaactatgagggc
attggagccttcatggacgggttcgaaaaccccgaggacacccccgctccaacccgtgtg
gaaatgagggaggaacgcatcgagcgcaagaaacgggaaaaggcggagcaagtggcatac
aaactagagcaggaaatcgctgtgtgggacccgcacagcgttgagaaatccactggagat
ccgtacaagaccctcttcattggccgcatcaactattacacttcagagtccaagctgagg
agggagtttgagtcctatggagtcatcaaaatgattgtactgcccaaagatagcgaggat
aagcccaggggctttgcttttattgagtatgaacatgaaagggatatgcattccgcttat
aaacatgccgacggtaaaaaaatcgatggaagaagggttcttgttgatgtggagagagca
agaacagtgaagggatggttaccaagacgattaggtggtggattagggggaactcgccga
ggtggtcctgaggtaaatatacttcattctggccgagaagatggcggtggtgctagagag
cgaggaggtcgtgaacgacgttcaaaatctcgtgaacggcgttctcgctcaagggatcga
aggcgtgatcgacggcgtagtcgctcaagagatcgcaaaagagttcgaaaatctaggtct
ccctcacgacgtcgatctagatctcgcgatcgtacggatcggaaacgacgaagaacgcga
tcaaaagagaggaaaagggaaagagatcgcaggggggatcgtcgtggcggtggtggtggt
gctggctcaggtggtgctggacctgaggaggactttggtaacagggttaaaacagagtgg
gatgaatctattcttgtaaaacaagagcctcgtgatgattatgatgaatatcataatgag
tatagcgaggtcaaacaggagccaatggatgagatggataggaaacccttactaaatgag
ggttatgaggaagggcaatattaa
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