Lepeophtheirus salmonis (salmon louse): 121120835
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Entry
121120835 CDS
T08214
Name
(RefSeq) uncharacterized protein isoform X1
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsm03041
]
121120835
03400 DNA repair and recombination proteins [BR:
lsm03400
]
121120835
Spliceosome [BR:
lsm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
121120835
DNA repair and recombination proteins [BR:
lsm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121120835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
121120835
NCBI-ProteinID:
XP_040571652
LinkDB
All DBs
Position
6:8697054..8704783
Genome browser
AA seq
1033 aa
AA seq
DB search
MSSRQRSDDRGFVNKKYGRGRTTRNFTPNQYQVYQKDQDSQNFFGSNHFGRVNQSDYLPN
GSQNSMDKNLQNNLVNYQVDQSFHIWSDNDDLYRDFPTNETSGFDSNAIPIEDEPFMSDE
FVTLDWYNSDLNLEVDRNNFCSGKPISNEGFGYMWAGARANYGATRGKVCYEVIINSNND
VSHLNEVSPHILRCGWSIDESSLQLGEEGFSYAYDGTAKAIVSNKFEDYGKPFGFGDVIG
CYLDLDCDPVNIGYTLNGEFLGIAFSIQQSQLSGRALFPHICSKNQEFTVNFGQLTDPLM
AIIPQYIHIGQLEMCDGLFHGSRAPKTRQDCEMIMLIGLPGSGKTFFAEDYKINNSDKRY
NILGISSILDKMSCMGMPRKLIQGVRWDNTIRSAVDCLRAITTIAATRRRNYIFDQANVS
PKVRERKIQPFNGFQRKAFVVLPTDDIYMQRIAKCEMKEGKEIPKDAVFTMKANFVLPEA
IETMFDEVVYTELGPREAARLVESYNNEAWRAGYKMSRSIEHFVDESLKYRNMMGINGPI
GKIINDVFFNEPGPYVSARPDGFIDSRRSFDGNDPQKLNYSHGPSFTNSTFYPTENEKRD
SLPPPVRHDQQFKTTNPDSFMSRNNNYSGIRSGKNYTPSNTITSKSHSNNSRRYSPNHNN
DEDSDIEIIKETNFINQPFRDRSNSPNARNFGSARRSRSRSQDGRPNNNRDNFYGHRRND
EFGMNNNDFGARNDRRTYNQGNSTRGTFNTPVEPDYKSNNKDNTSNYQYVRGSNGNNFTR
FNNSNNIRDPNKKGANSSKFTGSVGYFTKPSNTEQNNPISYNSGNFNDGYNNGGPAFGNN
SQGSFNNNTGNGKYRKEGYPNDGYNTDSRDCSGMKDVKFVSSNHSNATINKRFTEYSDSG
SNQTNTSIVNKPPNSTNSYNASFVDRSKSDKRPPSFTIPSVVPYPKGKQSAVPPAPHIRP
LSEVKVPTPPIIRSLPYEGSASYESAPPIVLNFKHQDGPTPPPVPPPSGQYSGYRKNSNM
ENRSYPNISYPKY
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgagacagaggtctgatgaccggggattcgttaataaaaaatatggaagaggg
agaaccacacgaaattttactcccaatcaatatcaagtgtatcaaaaggaccaagactca
caaaacttttttggaagcaatcattttggcagggtgaaccaatctgattaccttccaaat
gggtctcaaaatagtatggataaaaatttgcagaataatcttgtaaattatcaagttgat
cagagcttccacatttggtccgacaatgacgatttatatagagattttcctacgaatgaa
acaagtggatttgattctaatgcaattccaattgaggatgaacctttcatgagtgatgaa
tttgttaccttggattggtataattcggatttaaatctggaagtcgataggaataatttt
tgcagtggaaaaccaatttctaatgaaggttttggatacatgtgggcaggagctcgtgcc
aattatggggccacgagaggaaaagtgtgttatgaagtcatcatcaatagtaataacgat
gtgagtcatttgaatgaagtcagtcctcatattctgagatgtggttggtcgattgatgaa
tcttctcttcagcttggagaagaaggattctcatacgcttatgatggaacagcaaaggca
attgtctcaaataaatttgaagactatggtaaaccattcgggttcggagatgttattggt
tgctatttggatcttgattgtgatccagttaatattggttatacgctcaatggggaattt
ttgggtattgctttttctatccagcaatctcaattgtctggaagagctttatttccccat
atttgttcgaaaaatcaagagtttactgtcaactttggccagttgactgatccattaatg
gcaattattccacaatatatacatattggccaattggaaatgtgcgatggcttgtttcat
gggtctagggcccctaaaaccagacaagattgtgaaatgattatgttaattggcttacct
ggatccggcaaaacattcttcgccgaagattacaagattaataattcggataagcgctat
aacattcttggaatatcgtccattttagataaaatgtcctgtatgggaatgcctcgcaaa
cttattcagggtgttagatgggataatacaattagatctgctgtagattgtttgagagct
attacaactatcgcagctacaaggcggagaaactatatttttgatcaagcaaatgtctcg
cccaaagttcgtgaaaggaaaattcaaccttttaatggatttcagcgaaaagcttttgtt
gtattacctaccgatgatatttatatgcaacgcattgctaaatgtgaaatgaaggaagga
aaagaaattccgaaggatgctgtttttacaatgaaggctaactttgttttgcctgaagct
attgaaaccatgtttgatgaagtcgtctatactgaattaggacctagagaggctgcaagg
ctcgtagagagctacaataatgaagcatggcgagctggttataaaatgtcacgcagtata
gaacattttgtcgatgagagtttgaaataccgaaatatgatgggtatcaatggtccaatt
ggtaagataataaatgatgtgttttttaatgaacctggaccatatgttagtgccagacca
gatggttttattgattctaggagatcctttgacggcaatgaccctcagaagttaaattac
tcccatggcccatcttttacgaattcaacattttatccgactgagaatgaaaaaagagac
tctctacctcctcctgttcgtcatgatcaacaattcaagactaccaatcctgatagtttc
atgtcaagaaacaataattattctggaattagaagtggaaaaaattacactccttcaaat
acaataacatctaaatcacattccaataattctcgaagatactccccaaatcataataat
gatgaagactctgatattgaaataatcaaagaaacaaattttataaatcaaccattccga
gatcgttcaaattcccctaatgcaagaaattttggttctgcacgacgctcaaggagtaga
agccaagacggtagacccaacaacaatcgggataatttttatgggcatcgtagaaacgat
gaattcggcatgaataacaatgattttggagcaagaaatgatcggcgaacttataatcaa
ggcaatagtacgagaggtacatttaatacacctgtggagcccgactacaaatccaataat
aaagataatacttctaattatcaatacgttcgtggaagtaatggcaataattttaccaga
tttaataatagtaacaatattagagatcctaacaaaaaaggagccaattctagcaagttt
actggcagtgttggttattttactaaaccttcaaatactgagcaaaataatccaatcagt
tataattcgggtaattttaatgatggttataacaatggaggacccgcattcggaaataat
agtcagggttcgtttaacaacaacactgggaatggaaaataccgtaaagaaggctatccc
aatgatggatataatactgatagcagagactgtagtggaatgaaagatgtgaaatttgtt
tcttcgaatcacagtaacgccactataaataaaaggtttactgagtattcagactctgga
tccaatcagaccaatacttcgatagttaataaacctcctaactcaactaacagttacaat
gcttcatttgttgatcgttcgaaatctgataaacggcctccttcatttactattccctct
gtggtaccttatcctaaaggaaaacagtctgctgtacctccagcaccccatattagaccc
ctctcagaagtcaaagttccaactccacctattataaggtcactaccttatgaaggcagt
gctagttacgagtctgcaccacccatagttttaaattttaaacaccaggatggaccaacc
cctcctcctgtaccacctccgtcgggacagtattctggttatagaaaaaactcaaatatg
gaaaatcggagctatcctaatataagctatcccaagtactaa
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