Lepeophtheirus salmonis (salmon louse): 121121002
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Entry
121121002 CDS
T08214
Name
(RefSeq) uncharacterized protein
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04120
Ubiquitin mediated proteolysis
lsm04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121121002
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121121002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121121002
03036 Chromosome and associated proteins [BR:
lsm03036
]
121121002
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121121002
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
121121002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WD40_Prp19
EIF3I
WDR55
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_IFT140_1st
NBCH_WD40
ANAPC4_WD40
F-box
Beta-prop_WDR75_1st
F-box-like
Motif
Other DBs
NCBI-GeneID:
121121002
NCBI-ProteinID:
XP_040571807
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Position
6:complement(18336052..18337629)
Genome browser
AA seq
392 aa
AA seq
DB search
MNRLEIIFDIQRIGLNEVAENILYYLDYASLVSLKRTCWIIYIFISNTDIENIKEVNKLN
KEWKESNPKQIVLDVQGLVSCAKFFDDGRKVAVGIDHSLQVFHTSSQEDQPILSLCNENS
IIKCIDVNEEEKIIATGSTDGLLILWDAESGDQLILKQLFGRIDAIKWKSSRFVTAHFGR
AFDAGCISLREYISPTDFRVIHSIYEDLFPIFAIDFNDQFLSALEWSGTYNNVHGGNVNI
YRMNNLEPVANLSTVTGGYNYTNCRFFGNYLLTGGHDGVINIWEMPIHNDSDPMIIRSFI
AHNGIIVRLEVDSFLQRIVSRDITGEISVWDLSKYSEEAPLIDTDDLLLRKIDSMSRTVT
CLSMEKRRLFLGSIGAFNIQDFWSRSFSPNDI
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtcttgaaattattttcgatatccaaagaattggtctcaatgaagtagctgag
aatatactttactacctagactatgctagtctcgtaagcctcaagagaacatgttggatt
atctatatctttatttcaaacactgatattgaaaatatcaaagaagtcaataaactcaac
aaggaatggaaggagagcaatcctaaacaaattgttttggatgttcaaggtctcgtgagt
tgtgcaaagttttttgatgatggtcgtaaagttgccgtcgggattgatcatagccttcaa
gtctttcatacttcatcacaggaggatcaaccgattttatccttatgcaatgagaactct
attattaaatgtattgacgtaaatgaagaggagaaaatcattgctacaggatctaccgat
ggactgctcatactctgggatgccgaaagtggagaccaacttattttaaagcaactattt
ggacgaatagatgctataaaatggaagagttctcgcttcgtaactgcacattttggaaga
gcgtttgacgctggctgtattagtcttcgcgaatatatttccccaacagacttccgagtg
atacattccatttatgaagacttatttccaatttttgctatagactttaatgatcagttt
ttatccgctttggaatggagtggtacgtataataatgttcatggagggaatgtgaatatt
tatcgtatgaacaatctggagccagtcgctaatttatccaccgtcactggtggatataat
tatacaaactgtcgattttttggaaattacttactaactgggggtcatgatggagttatt
aatatatgggaaatgccgatccataatgattcggatccaatgataattaggtccttcatt
gcccacaatggaattattgttcgtttagaagtggattcctttttacaaaggatcgtttca
agggacattacgggtgaaatatctgtatgggatttaagtaaatacagtgaagaggctcct
cttattgatacagacgatcttttactaagaaaaattgattccatgtcacgaacagtcact
tgtctgtcaatggaaaaacgtcgattgtttttaggatccattggtgcttttaatatccaa
gacttttggagtagatcattctcgccgaatgatatttaa
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