Lepeophtheirus salmonis (salmon louse): 121121004
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Entry
121121004 CDS
T08214
Symbol
ldbr
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein ldbr
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsm03041
]
121121004 (ldbr)
03009 Ribosome biogenesis [BR:
lsm03009
]
121121004 (ldbr)
Spliceosome [BR:
lsm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121121004 (ldbr)
Ribosome biogenesis [BR:
lsm03009
]
Eukaryotic type
90S particles
RNase
121121004 (ldbr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
PRY
Motif
Other DBs
NCBI-GeneID:
121121004
NCBI-ProteinID:
XP_040571809
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All DBs
Position
6:31458816..31460712
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AA seq
500 aa
AA seq
DB search
MRIAVEGCAHGCLEEIYSTIQDIEKRHKYKVDLLLCCGDFQSVRNLEDLKTMACPDKYKS
AGSFYKYYSGELVAPILTIFIGGNHEASNYLQELPYGGWVAPKIYFLGKASVINVGGIRI
GGISGIYKSYNYTSGHHEHLPYSPKTLRSVYHIRNLEVFRLKQLEKSPPDIMLSHDWPCG
ITDYGNCEQLLRFKPFFKDDIEKNALGSPPCMELLHLLQPKYWFSGHLHAKFSALVDHNS
SNKQTKFLALDRCLPKRRFLQIIDYPNESKSVSISHDPEWLAILKSSNDLLSVNNSKVYM
PGPGYPDRFDFCPTTEEVDHIKKIFENEFSILEDSFVNSTKNVFEKPDQAAKDLFKTSMP
SIPVFNTQTSIICEKLNIFDPVRLSLEKKNMYVGFTDFKDDKCNDGSLNHSVQQSFNEDE
IILSDEEETTLFSKNNSDFIKSHNEDEIILSDEEENTSVSKDKSDFVKSHSEDRIIISDK
KEENNKTTTDDFDETANNLL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcggatagctgtggaaggatgcgcccatggatgcttggaggagatatatagtactatt
caggatatagaaaagagacataagtacaaagtggatcttttgctctgctgtggagacttt
caatccgtccggaatttggaggatcttaagaccatggcatgccctgataagtacaaatct
gctggttccttttataagtactactcaggtgaattagtggctcccattttgactattttc
attggtggaaatcacgaagcctcgaactaccttcaagaattaccgtacgggggatgggta
gctcctaaaatttacttccttggtaaagcaagtgttataaatgtcggaggaattcgcatt
ggagggattagtggtatttataaatcctataattatacatctggacatcacgaacattta
ccttactcaccaaagactctgagatccgtctaccacattcgtaatcttgaagtttttcgc
cttaaacaactcgaaaaatctcctccagatataatgctttcacatgattggccatgtgga
attactgattacggaaattgcgagcaacttcttaggttcaaaccatttttcaaagacgac
attgaaaaaaatgctctcggttctcctccctgtatggagttgcttcacttacttcaacca
aaatactggttttctggacatttgcatgccaagttttcagctcttgtggatcacaatagc
tctaataaacaaacaaagtttttggcattagatcgatgtcttccaaaacgaagatttctt
caaattatagattaccccaatgaatctaaaagtgtttcaatttcacatgacccagagtgg
ttagccatactcaaatcctcgaatgatttactatccgttaataatagcaaagtgtatatg
cctggtccaggatatccggatcgattcgatttctgtcctaccactgaagaagttgatcac
atcaaaaagatatttgaaaatgaattttcaatattggaagattcttttgtaaattctacc
aaaaatgttttcgaaaaacctgatcaagctgccaaggacttatttaagacgtccatgcct
tcaattccagtatttaatacacagacaagtattatctgtgaaaaattaaacatttttgat
cctgtacgtctttcactggaaaagaaaaatatgtatgtgggatttacagactttaaagac
gataaatgcaatgatggatctttgaatcactcggttcaacagtcattcaatgaggacgaa
ataattttatctgatgaggaagaaactactttattttcaaagaataatagtgattttata
aaatctcataatgaggatgaaattattttgtctgatgaagaagaaaatacttcggtttcg
aaggataaaagtgattttgtaaaatctcacagtgaggatcgaattattatttcggataaa
aaagaagaaaacaataagaccacgactgatgactttgacgagactgcaaacaatcttttg
taa
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