Lepeophtheirus salmonis (salmon louse): 121121027
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Entry
121121027 CDS
T08214
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 2-like
KO
K06674
structural maintenance of chromosome 2
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsm03036
]
121121027
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
121121027
Condensin II
121121027
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
SMC_hinge
AAA_21
AAA_15
AAA_29
Rod_CreS
Motif
Other DBs
NCBI-GeneID:
121121027
NCBI-ProteinID:
XP_040571825
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All DBs
Position
6:9554908..9560646
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AA seq
1178 aa
AA seq
DB search
MYIKSIVIDGFKSYGTRTEVQDFDPQFNAITGLNGSGKSNILDSICFLLGITNLSHVRAQ
NLQELVYKNGQAGVTKASVSITFDNRDKSKTPLGYESYDEIVITRSVVLGGKNRYLINGT
NIQNNRVNDLFRSVQLNINNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYESKKQN
AQKTIEKKDAKLKEIDNILKEEINPTLAKLKQERNTYLEYQKIQRELEHLTKLYVAYKFI
SAEKANSRLQTDLEAVNKTMDGVRTAISHGLEEIKKIAERIITLEKERDEELGGKLEELE
EALKNKSNNCMKLEASLKSLLDNKKLEAKKCQQIQRGMDTDKKALCEKQKINDGLKEVYD
VLRDEDERATKALAVAQKRYEAISLGKFCSDDGEEGATLQEQVIKMKGQISDAQTEVATS
EMKLKHNKSNLKNIEMEMKKTKGQYELDSKNLISYETQVKEAKSSMDKLNYQEGRLESLM
EQIHSSESEFGHLKRNYDSMAARFPWLEFRYRDPEPNFDRSVVRGVAANLFDVKDSTFCV
ALDTCAGGKLMNVIVNSSVAAGKILKNGNLARRTVMLPLDKISGYTISDSVFRSAQKLVG
SDNVFRALDLISFDRSLSSAMEHIFGGSLVVRNLDQANTLAYHREVSKVCVTLEGDVVKP
SGDLSGGAASKGGSTLIQIQSLKKTLADCNAKKKQLDSLFAEKNAIKDVHHRYKSLKSVY
DQKESELRMIQARLEQTKHHQLGQEVSELTSQCTELEEKISEAKKMEKDSSSKVKDIEYK
IKNAKSIKEKELKEAEKEVKQCKKAEAEAKAKWSEKEAEDASLKLEISELKKSILSAEEQ
LKATEEAISEFEKEYAESSKSVEEMKSDVNNAKKAVKEQKNILNANYKEMNSEKAREENI
KKENMERELEIQQLKHKISKATDEAKEAEKTVKLMVEQYEWINDDRQFFGKPNTAYDFST
TDPKEAGRKINKLEETKDKLSKTVNMRAMKMLGKAEEQFNDLMRKKTTVETDKAKICKVI
EELDIKKKEELRKAWSIVDESFGKIFSSLLPGAKAKLQPPDGQDVLDGLEVRIGFGEVWK
ESLSELSGGQRSLVALSLILSLLKFNPAPLYILDEVDAALDLSHTQNIGNMLKKYFKDSQ
FIVVSLKDGMFNNANVLFRTKFVDGLSTVSRTAQNIRH
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaaatccattgtgattgatggatttaagtcttatgggactcgaacggaagtt
caagactttgatcctcagttcaatgccattacaggactcaatggctcgggtaaaagtaat
attttggactcgatttgctttctcctgggaataacgaatctaagtcatgtacgagcccaa
aacctccaggaactggtctacaagaatgggcaagctggagtgacgaaggcgtcagtgagc
atcactttcgacaatcgtgacaagagcaagactccactgggctacgagtcttatgacgag
attgtgataacgcgaagtgtggttctgggaggaaagaatcgctatctcatcaacggaaca
aacattcagaacaacagagtcaatgatctcttccgctccgttcaactcaacatcaacaat
ccacatttcctcattatgcaaggacgcatcaccaaagtcctgaatatgaagcccccagag
atcctctccatgctggaagaagctgctggcaccagaatgtacgagtccaaaaaacaaaat
gcgcagaaaaccattgagaaaaaagatgcgaaactgaaggagatagataatatcctcaaa
gaagaaataaatcctactctggccaagctcaaacaggaacgtaatacctacctggagtat
cagaaaattcaaagagagttggaacatttgacaaaactatatgtcgcatacaaattcatt
tctgcagagaaagccaattcacgtttacaaacggatttagaagcagttaataaaaccatg
gacggtgtacgtaccgctatatcccatggattggaagaaattaaaaaaattgcagagcga
attatcacacttgagaaagagagagatgaagagttgggtggtaaattggaagagttggag
gaggcattgaagaataaatccaataactgtatgaaacttgaagcctctcttaaatcctta
cttgataataagaaacttgaggcaaaaaaatgccaacaaattcaacgaggaatggatacg
gataaaaaagctctttgcgaaaaacaaaagattaatgatggtctgaaagaagtctacgat
gttttaagagatgaggacgaacgtgcaacaaaagctctggcagtagctcagaagcgctat
gaggccatatcactcggaaaattttgttctgacgatggtgaggaaggcgcgactcttcaa
gagcaagtcattaaaatgaaaggccagatatcggatgctcaaactgaagtcgcaacctcc
gaaatgaagctaaaacataataagtccaatcttaaaaatatcgagatggaaatgaaaaag
acgaagggacaatatgagctagactcaaagaatctcataagttacgaaactcaagtcaaa
gaagctaagtcttccatggacaagctcaactatcaagaaggaaggttggagtccttaatg
gaacaaattcattcctctgaatcggagtttggtcacctcaaaagaaattatgactccatg
gctgctagatttccctggctagaatttagatatcgggacccagagcctaactttgatcga
agtgtcgttcgaggggttgctgcaaatttatttgatgttaaggattcaaccttctgcgtt
gctttggacacttgtgctggtggaaagttaatgaatgtaattgtgaatagttctgttgct
gctggaaagatccttaaaaatggaaatcttgcacgaagaacagtaatgttacccttggac
aaaatctcaggatatactatatcagacagtgtatttaggtctgctcagaaattagtaggc
tctgataatgtattccgtgctttggatttgataagttttgaccgatctttatcaagtgct
atggagcacatttttggaggatcccttgttgttaggaatttagatcaagctaatacactt
gcctatcacagagaggtttctaaagtctgtgttaccttagaaggagatgttgtgaagccc
tctggtgacttgagtggtggagcagcatctaaagggggttccactctaattcagattcaa
tcactcaaaaagacattggcagattgtaatgcaaaaaagaagcaattggattcactcttt
gctgaaaaaaatgcaattaaagatgtacatcacagatataagtcactaaagtcagtatat
gatcaaaaagaatctgaattaagaatgatacaggctcgtcttgaacaaactaagcatcat
caacttggtcaagaagtatctgaattaacctcacaatgtacggaactagaggaaaaaatt
tctgaagctaaaaaaatggaaaaagatagctcttcaaaggtgaaagatattgaatataag
attaaaaatgccaaatccatcaaagaaaaggaattaaaggaagcagagaaagaagtgaag
caatgtaaaaaggcagaagcagaagcaaaagcaaagtggtctgaaaaggaagctgaggat
gctagtttgaaacttgaaataagtgaactaaagaagtccatactatctgccgaagaacag
ttgaaggctactgaagaggctattagtgaatttgaaaaagaatatgctgaatcgtcgaaa
tccgttgaggaaatgaagagcgatgtcaataatgcgaaaaaggctgttaaagaacaaaaa
aatatcttgaatgctaactacaaggagatgaactcagagaaagcccgcgaagaaaatatt
aaaaaagagaatatggagagagaactcgaaattcaacaattaaaacataaaatttcaaaa
gctactgacgaagccaaggaagctgaaaaaactgtcaagttgatggttgaacaatatgag
tggattaatgacgatagacagttctttggaaagccaaatactgcctatgatttctccact
acagatccaaaagaagctggacgaaaaattaataaacttgaggaaaccaaagacaagctc
tccaaaactgtaaatatgagggctatgaaaatgttgggtaaggctgaagaacaatttaac
gatcttatgagaaaaaagactactgttgagacggataaagccaaaatatgtaaagtgatt
gaagagcttgatatcaagaaaaaggaagaactacgcaaggcctggagtattgttgatgaa
tcatttggtaaaattttctcatctttgcttcctggagctaaagctaagttacagcctcct
gatggtcaagatgtacttgatgggctggaggttcgtattggttttggagaagtttggaaa
gaatctctatctgaattaagtggaggtcaacggtctttagtggctctttccctcatttta
tctttattaaagtttaacccggctccactctatattttggacgaagtagacgctgccctc
gatctttcacatactcaaaacataggaaacatgttgaaaaagtattttaaagactcacag
tttattgttgtctccctcaaggatggaatgttcaataatgctaacgttttgtttcggact
aaattcgttgacggattgtcaactgtatcgaggacagcgcaaaacataagacactga
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