Lepeophtheirus salmonis (salmon louse): 121121056
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Entry
121121056 CDS
T08214
Name
(RefSeq) integrin beta-2
KO
K06588
integrin beta 5
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04145
Phagosome
lsm04148
Efferocytosis
lsm04512
ECM-receptor interaction
lsm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121121056
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121121056
04148 Efferocytosis
121121056
09142 Cell motility
04820 Cytoskeleton in muscle cells
121121056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121121056
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lsm04515
]
121121056
Membrane trafficking [BR:
lsm04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
121121056
Cell adhesion molecules [BR:
lsm04515
]
Integrins
Integrin beta subunits
121121056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
vWA_SIBA-E
EGF_integrin
I-EGF_1
EGF_2
VWA
EGF_TEN
VWA_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
121121056
NCBI-ProteinID:
XP_040571857
LinkDB
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Position
6:31489875..31492839
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AA seq
878 aa
AA seq
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MQLFKTTFFSIPILSFTLLHIFSLPLSRASSSCTDDLGNKITDCDACMRHLGCVWCNDRE
PNGMARGCITESQAMSDCDKSINLKNSIEYIRDSPLDTDSSDKIRVFPQEVQLTLRPNHP
YELDFEVALSDNPVDIYFLMDLSSSMNKSKSNLVDASESIARRISELSSSFKIGFGSFSD
KLVPPFGMTKRYSDSRNYLRSYSYRHQMSLGTDVEEFRRRVQFSDLAGNVDSPESGLEAL
SQAILCEEEIGWTPGDVRRVIIFISDKEQHFALDGKMGGLYTMSQGKCELSSVRGETYLT
YSKSREYDYPSFGQIRHELRKKNVVVIFAIESFMVSLYRDLSLFLQGTDNVGALTEDPSS
IEEIVVEQYQSIKNRISMTVNSSHHGLLKCTLHGDCISEKTLKRQQSDLVCNDVETQKPY
KFKVKVTASSDLCLETDTDGQHKSFSIQLQGYEKDQLSVKAKCAYCSCPDVEPGSRKCSG
NGNFICGGCQCYDGFSGRNCECNDNDVLNAQNREDSCKFESEDEVCNGRGECVCAKCLCS
GSEYLGKACQCRSKDCPGFSSSSGICNGKGICECRESNSTTPTCKCDEGFSGDNCDCPTS
DERCRAALTGDDVCSGKGECICGKCQNCKDGYRGDFCQIDPVISVCNKLSPCIKHFLLRK
NSTENELRLEKKLCSSTFIGNTFRPYLNMGCKIQDDLSLEDSFFLLIGDYNDCDQMEQRY
NQSLAQKEDEEGNDELPTRGDLGRIEQIRKIDTADFKFCTFRYGDCNIEYFHNRLDSNDI
YEERKSGVVYVVYSKNKDGVWSPHTNCREGLSLPLILGSSVGSLLLFGLITLIAFCAIVT
TRDKRAYGQYEAWKAENIRNLQGNSNPTYIQPRSIVDN
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcttcaagacgaccttcttctcaattcctattctttcctttacattgctacac
atattctctcttccgctcagcagagcatcatcctcatgcactgatgaccttggaaacaaa
ataactgactgtgatgcatgtatgcgccacttagggtgtgtttggtgtaatgatcgtgaa
ccgaacggaatggcaagaggctgtataacggagtctcaagccatgagtgattgtgataaa
tcaatcaatttgaaaaactcaattgaatatattcgtgattccccattggacacggactcc
tcagataaaatacgcgtctttcctcaggaagttcaactgacacttcgtccaaaccatcca
tatgaattggattttgaggttgctctctcagacaatcctgtggatatttatttccttatg
gatcttagttcatcaatgaataaaagtaaaagcaatttagtagacgcgagtgagtccatt
gcccgaaggataagtgagctctcttcctcctttaaaattggttttggaagtttctctgat
aagcttgttccaccttttggaatgacgaagcgctactcagactcaaggaactatctgcgt
tcttatagttatcgccatcaaatgagtcttggaacggatgttgaagagtttcgtcgaaga
gtccaattttctgatcttgcaggaaatgtagattcacccgagtcaggccttgaagctctt
tctcaagccatactctgtgaagaagagataggatggactccgggcgatgttagaagagtt
atcattttcatatctgataaagaacagcactttgctttggatggaaaaatgggaggtctt
tatactatgtctcaaggaaaatgtgaattaagttccgttcgaggggaaacatatctaact
tattccaagagtagagagtatgattatccttcctttgggcaaattaggcacgagcttcgt
aaaaaaaatgtagtcgttatttttgctatcgagagcttcatggtgtctttgtacagagat
ttaagtctattccttcaagggacagacaacgttggagcactcactgaagatccaagttct
atcgaagaaattgttgtcgaacagtatcaaagtataaagaacagaatcagtatgaccgtt
aatagtagccaccatggattgcttaaatgcaccttgcatggagactgtatttcggaaaaa
actctgaaaagacaacagtctgatttggtttgtaatgatgttgaaactcagaaaccttat
aaatttaaagttaaagtaactgcatcctctgatctgtgtttagaaactgacacagatggg
cagcataagtcattctccattcaactgcagggctatgaaaaagatcagctttctgtcaaa
gcaaaatgtgcatattgttcctgtcctgatgtagaaccaggctctagaaagtgttctggg
aacgggaatttcatttgtggaggttgtcagtgctatgatggatttagtggaaggaattgt
gaatgtaatgataatgacgttttgaatgctcaaaatcgagaggattcttgtaaattcgaa
tctgaagatgaagtatgtaatggacgaggggaatgcgtttgtgctaagtgtctgtgtagc
ggttctgaatatctgggcaaagcctgccagtgtagatcaaaagactgtcctggattttct
tcctccagtgggatatgcaacgggaaaggcatttgtgagtgtagggaaagcaactctacg
actcctacttgtaaatgtgatgaagggttctctggagataattgtgattgtcctacaagt
gatgaacgatgtagagctgctttaacaggtgatgatgtatgttctggaaaaggagagtgt
atctgtggtaaatgccaaaattgtaaagatggttatagaggagatttctgtcaaattgat
ccagttatatctgtttgtaacaagctctccccctgtattaagcatttccttctacggaaa
aactctacagagaatgaactaagactcgagaagaaactctgttcctccactttcatcgga
aatacttttcgcccatatttgaatatgggttgtaaaattcaggatgatttaagtttggag
gatagtttctttcttcttattggggattataatgactgtgatcaaatggaacaaagatat
aatcaaagtctagctcaaaaagaagatgaggaaggaaatgatgaattacctacacgagga
gatcttggacggatcgaacagataaggaagattgacacggcagatttcaaattttgtaca
tttagatatggggattgtaacattgagtattttcacaaccgattggattcgaatgatatt
tatgaagaaaggaaaagtggagttgtctacgtcgtttattcaaagaataaagacggcgtt
tggagtcctcacaccaattgtcgtgaaggtctgtcccttcctctaattttgggttcatcc
gttggctctctattactttttggtttaatcacattaattgctttttgtgctattgtaacg
actcgggataaaagagcctatggacaatatgaggcttggaaagcagaaaacattcgaaat
cttcagggtaacagtaaccccacgtatatacaaccaagatctattgttgataattaa
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integrated database retrieval system