KEGG   Lepeophtheirus salmonis (salmon louse): 121121068
Entry
121121068         CDS       T08214                                 
Symbol
tex
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
lsm  Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03013  Nucleocytoplasmic transport
lsm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lsm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121121068 (tex)
  09122 Translation
   03013 Nucleocytoplasmic transport
    121121068 (tex)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsm03019]
    121121068 (tex)
   03041 Spliceosome [BR:lsm03041]
    121121068 (tex)
Messenger RNA biogenesis [BR:lsm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     121121068 (tex)
Spliceosome [BR:lsm03041]
 Complex C
  Other components
   EJC/TREX
    121121068 (tex)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    121121068 (tex)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 WDR55 EIF3I Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_IFT122_1st RMC1_N WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd eIF2A Beta-prop_WDR36-Utp21_1st Tricorn_2nd Beta-prop_EML Beta-prop_HPS5 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_SPT8 NBCH_WD40 Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 PD40 Beta-prop_DCAF12 Beta-prop_ACSF4 Peptidase_S9_N Cytochrom_D1 PROPPIN VID27
Other DBs
NCBI-GeneID: 121121068
NCBI-ProteinID: XP_040571868
LinkDB
Position
6:17228953..17232289
AA seq 321 aa
MVMLEEWEELQNRFRKNQKTREHSAHSSKVHSVNWSCDGRKLASGSFDKTVCLFSLSNDR
LNKEHTYRGHGDSVDQLCWHPSNPDLLATASGDKSVRIWDARASKSISTIHTKGENINIS
WSADGRTIAVGNKEDLVTFIDCKTHKIKHEEAFKFEVNEISWNHASDLFFLTNGHGCIHV
LNYPEMELKYVLQAHPGNCICIKFDPTGKYFAVGSADALVSLWDANELACVRTFSRLDWP
VRTISFSYDGKLLASASEDLQIDVGHVESGNKVCDVSVTSPTFTIAWHPKRYLLAYACDD
KDKYDHRDAGSLKVWGFPSDD
NT seq 966 nt   +upstreamnt  +downstreamnt
atggtcatgttggaggaatgggaagagcttcagaatcgttttcgtaaaaaccaaaaaact
cgggagcatagtgctcattcctcaaaagtacactcggtaaattggagttgtgatggtaga
aaactggcctctggatcttttgacaaaactgtttgtctcttttctctctcaaatgaccgt
ctcaataaagagcatacctatcggggtcatggagatagtgtggatcagctttgctggcat
cctagtaaccctgatctacttgcgactgcttctggtgataaatctgtgcgtatatgggat
gccagagcaagtaaaagtatatcaactatccatactaaaggtgaaaacatcaatatatcc
tggtcggcagatggtcgaaccattgctgttggtaacaaggaggatcttgtcacgtttatt
gattgtaaaacacataaaatcaagcatgaagaagcattcaagtttgaagtcaatgaaata
tcctggaaccatgcttcagatttattttttttaactaatggccatggatgcattcatgtt
ttgaactatccagaaatggaattgaagtatgtccttcaagcccacccagggaattgcatt
tgcatcaaatttgatcctacaggcaaatattttgccgtaggtagtgcggatgccctcgtc
tccttatgggatgctaacgaacttgcttgtgtaagaactttttcaagattggattggcct
gtaagaaccatttcatttagttatgatgggaaattgttagcttctgcttcggaggatctt
caaattgatgttggccatgttgagagtggaaataaagtttgtgatgtatctgttacttct
ccaacttttactattgcctggcatcctaaacgatacttactggcttatgcttgtgacgat
aaagataaatatgatcatagggatgccgggtccttaaaagtttggggatttccttctgat
gattaa

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