Lepeophtheirus salmonis (salmon louse): 121121079
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Entry
121121079 CDS
T08214
Name
(RefSeq) lamin Dm0
KO
K07611
lamin B
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121121079
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsm04812
]
121121079
Cytoskeleton proteins [BR:
lsm04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
121121079
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
LTD
LPP
ZapB
YscO
CENP-F_leu_zip
YabA
Fas1-AflB-like_hel
HMMR_N
Myosin_tail_1
DUF2721
ATG16
DUF4795
Motif
Other DBs
NCBI-GeneID:
121121079
NCBI-ProteinID:
XP_040571880
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Position
6:12301319..12305845
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AA seq
595 aa
AA seq
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MATRTSRRGTKEHTPIVTPPSSTGSSRIRSPSPLSPTRVTRKEEKHQLQQLNNRLAGYID
RVRSLNSHIGSLESKVASIEETKHSEITSIKFKYDKELGYTRKALDDVAKERAKLQIDAE
KLERENRDLRIENSQREKNCNDLEKQIKALMAKIAALTNDVDDLRRDVNILRPENAKLKK
KLEDARKNLEAETLQRIDAQNQLQTSQEGLKFDNEVLQTQLNETRRIKAVEISEMDGKYR
EEYDSKLREQLESMRSSYESLMDSNRGDINRKYDADLEKYKRLYAESRSSGAGQAQELRE
YQTKISGLVSRNSELEASNSALNTRMSELLREMEDSEACHRRELAQRDEELRSKDEEMES
MLKDYNALMEIKVALDMEIAAYQKLLEGEEARLGLSQVESPSSSMVSSSGKFSSFFDSGS
GFGKGMKRKRILEEESESYDTVSELKGKPSVIIEPLDDDAKGITISNHTDDDISIGGWKL
SCIVGSKEEELENGVDTVFKFHRSIVLPTGSSSTVYSSDATDVDHSPPTSLIMKNKSWSK
GEYSVVTLTNKDEEVESIRVTKKIKSYSSKRHDGGGSSSGEIYHHSGDPSKCSVM
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacgaacgtctcgtcgtggaacgaaggaacacactccaattgtgactccacct
tcatccactggatcttctaggattaggtctcccagtcctttgtctccaactcgagtcaca
cgtaaggaggaaaaacatcagctccagcaactcaacaacagacttgctggatatattgac
agggtacgaagcttgaattctcatattgggtcattagagtccaaggtagcttctatcgag
gaaacgaaacactctgaaataaccagcataaaattcaaatatgataaagaactaggatac
acaaggaaggctctcgatgatgtcgctaaggaaagggctaaattgcaaattgatgcagaa
aaattggagagagaaaatcgggatctacgtatcgaaaattctcaaagagaaaaaaattgt
aatgatctcgaaaaacaaattaaggccttgatggctaaaatagctgcactcactaacgat
gttgatgatctcagacgtgatgtcaatatactacgtcctgaaaatgctaaattgaaaaag
aaacttgaggatgcacgtaaaaatttagaagccgaaacactccagcgcattgatgctcaa
aatcaactccaaactagccaagagggtctcaaatttgataatgaagttcttcaaactcaa
ttgaatgaaaccaggaggattaaggccgttgaaatttcggagatggatggtaaatacaga
gaagaatatgattctaaacttagagaacaattggaatcgatgagatcttcatatgaatca
cttatggactcaaaccgaggagatattaatcgtaaatacgacgctgatcttgaaaaatat
aagaggctttatgccgaatctcgaagcagtggagctggccaggctcaggaacttcgtgaa
tatcagaccaagatttcaggtcttgtctctcgtaattctgaattagaggcttctaactct
gctctcaataccagaatgagtgaactcttgagagagatggaagattctgaagcttgtcat
cgtcgtgagcttgcacaacgagatgaagaactccgaagcaaggatgaggagatggagagc
atgcttaaagattacaatgctctcatggagattaaagttgctttggatatggaaattgcg
gcctatcaaaaactcttggaaggagaagaggctcgtcttggtttatctcaagttgagtca
ccttcttcatcaatggtttcctcttccggaaaattttcttctttttttgactcaggaagt
ggatttggaaaggggatgaagagaaaacgtattttggaagaagagtctgaaagctatgac
actgtttcggaattgaagggcaaacccagtgttatcattgagcccttggatgatgatgct
aaaggaatcactatttcaaatcatactgatgatgatattagtattggtggatggaagtta
tcttgtattgtaggtagcaaggaagaagaacttgaaaacggagtagacacagtattcaaa
tttcaccgctctattgtcctaccaactggcagtagtagcactgtttactcgtctgatgca
acagacgtggatcattctcccccaacttcactgatcatgaaaaataaaagctggagtaaa
ggcgaatactcagttgtaactcttaccaacaaggatgaagaggtcgagtctatccgtgtt
acaaagaaaatcaagagttactcctcaaagagacacgatggtggaggatcatcatctgga
gagatctatcatcattctggagatccctctaagtgctccgtaatgtaa
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