Lepeophtheirus salmonis (salmon louse): 121121084
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Entry
121121084 CDS
T08214
Symbol
Rich
Name
(RefSeq) LOW QUALITY PROTEIN: guanine nucleotide exchange factor subunit Rich
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121121084 (Rich)
Membrane trafficking [BR:
lsm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
121121084 (Rich)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
WD40_WDHD1_1st
InvH
Motif
Other DBs
NCBI-GeneID:
121121084
NCBI-ProteinID:
XP_040571895
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All DBs
Position
6:37810848..37816561
Genome browser
AA seq
1499 aa
AA seq
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MYYPVGWPKVLQFPQLESGKLQQVICNLDKILCAILTSDSLLIWYIKPCVPIICHRRCEN
SLEELGNNVSVQWKPDSSMLIVSTSKSHLIVYELVVPTNTKTLYELVESSYPTFKRESDE
LFIKENIPPLIFSKAYEFEIEGGISDVVAIREELMIATCDGKILRYSWQGEEKRDFSLNL
KRIPFCTDQQVIRAVPLADPGVFVKNIKYSPLLGGYAIVLNDGRAGFLASTDSKFDPNTV
TGIWAMHLEDATTVALNHKYKLIAFGRKNSHGILYNIDEMTGGLSEVHKLILSTHDYPGF
PGSVTTLRWTPDGTALAMVWSFGGFSIWSTFGAMIMCSLCWDYGIHVSDPVIQNPLCIKS
LDWTAEGYQLWMINAEKRTERKSDPEFAPFPDKDRNGAKKESKLFAFANKALVINFAKSP
MTVNPCMSKQQHIYLQAEDRIYINLGRISSVNVDEETVILSTIENGINLHPPLPKNDCNN
HLALMSAGAKSWNTINIPHSYIGNSYPIRYTALDDECEYLAVAGRTGIAHYSLIQRKWRL
FGNETQEKDFIVTGGLIWWKGNIIMGVYNFSLQQDEIRIYPKTEKLDNLYCRVEKIESQV
ILLNTYNDNLIVYTSDNSITLYTMKHSSPPAISSVTLTKRYEFDCRDIQGFTFHPACVIL
VALTNIRIETSRFSTNNRDSVPRETSVYPPSIPEAQQTSSLSIIMNVHGRVMMIKIEKDD
TNEYHRKLSLPTVLVSNCETIWFPKDTNLEKPHLTASLWLYCGSHGMKVWLPVFPREGDE
AHTFMSRRIMLHFPLNKFYPLAILFDDAIILGAENDTILLGNDTNSTISLPYSTLERTSL
LFLHPILRQLIKRNLGFHAWEIARTCMMLPYFSHTLELLLHEVLEEEATSTEPIPDALLP
SIVSFIQEFPVYHQTIGRCARKTEVALWPHLFSTVGSPRALFTECLNCGDLDTAATYLLI
LQNLEPPSVAQNHATLLLDAALDQTYFNLVKELVRFLKRIDPDDAGGPRQLSTTNPSYGP
VSHKVEGPEDEISILLGTLQVPRTRSASVPIKTTSSPKEKISNNSINTSSHRPGDVTKNT
NQNRTRKTSSGGSKDADKSSSLEYLSPDEFYIDVILQRHARKLLSNCRLFDLGTFAAQLD
FHTVTWLKKEANRAARLDNYLQALKKIHADFNWPFPIFFPNSVMETENGINTTSSSSLVA
PSQSEDEISSSSGLPQVQVDSGYQSRPPTENGREVGGGELGILSEKTINAMLRPHSGYRE
DLSIASEDVSSIAGGIEDNSVLEEWANKSESISKTVLSKNENFVQQDVEKKGSPRSEVQL
RYLLQIMMEANCLEIASLISVVLKDYLALIRIVNAARSPPNDKTVVSRLYQNLKAIEAWA
QSECHGYTPFFNRIQPQLNSLKAFLLQMPQVPNIPRQSSANSSLLKGGANKHLNLNRSLS
MGDYPKDPGVKIDLSKYSPSKKSHYDATESNDIKEKGSSPSEEIVELPTVDEDGSCIIS
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atgtattatcccgtgggttggccaaaggtcctccaattccctcaattggagtcgggaaag
cttcaacaggttatttgtaatttagacaagattctatgtgccattcttacttccgactcc
ttactcatttggtatatcaagccctgtgttcctatcatttgccatcgcagatgcgaaaat
tccctggaagaacttggaaacaatgtatctgttcaatggaaacctgattcatctatgctc
atcgtctctacgtccaaaagccatctcattgtctatgagctcgttgttccaacaaatacg
aaaaccctctacgaattggtagagtcttcctatccaacctttaagagagaaagtgatgaa
ctctttatcaaagaaaatattcctcccctcatcttttcaaaggcctatgaatttgaaatt
gagggtggaatatctgacgttgtagccattcgtgaagagctcatgattgcaacttgcgat
ggaaagatccttcgctactcctggcagggggaggaaaaacgtgatttttcattaaatcta
aaacgaataccattctgtacggatcaacaagtcatcagagctgttccacttgctgatcca
ggtgtctttgttaaaaatattaaatattctccacttcttggtggatatgccattgtatta
aatgatggacgagccggctttcttgcttctacggattccaaatttgacccaaatactgtt
actggtatatgggcaatgcatttagaggatgcaacaacggtggccctgaatcacaaatac
aagctcatagcttttggaaggaaaaactcccatggaattttgtacaatattgatgaaatg
acaggagggttatctgaagttcacaaacttattctttctacacacgactatcctggattt
cctggatctgtaactacactcagatggactcccgacggaactgcacttgctatggtctgg
tcctttggaggattttccatttggtcaacatttggggcaatgattatgtgttcattatgt
tgggattatggcattcatgtctctgatcctgttattcagaatcctctttgtattaaatcg
ctagattggactgctgaagggtatcaactttggatgatcaatgctgaaaagcgtacagaa
agaaagagtgatccagaattcgctccttttccagataaggatagaaatggagcaaaaaaa
gagtccaaattattcgcctttgctaataaagctcttgttattaattttgcaaagagtcca
atgactgttaatccctgtatgagtaaacaacagcacatatatctccaagcagaagatcgg
atatacatcaatctgggtagaatcagctctgttaatgttgatgaagaaactgtcatatta
agtacaatagaaaacggcattaatttacaccccccactacctaagaatgattgtaataac
catttagctctaatgtctgctggtgctaaatcctggaatacaattaatatccctcatagt
tatatcggaaatagctatcctattcgttatactgcacttgatgatgagtgcgaatatcta
gctgttgctggacgtaccggtattgctcactactctcttattcaaagaaagtggcgactt
ttcggtaacgaaactcaggaaaaggattttattgtcacaggtggcttaatatggtggaaa
ggaaatattattatgggggtatacaatttttcattgcaacaagatgaaattcgcatttat
cccaagactgagaagcttgataacttgtactgcagagttgaaaaaatagaatcccaagtg
attttgctaaatacatataatgataacctcatagtgtatacaagtgataatagtattact
ttgtataccatgaaacactcttcacctccagccatttcttcagtaacgttgacaaaaaga
tacgaatttgactgcagagatatacagggttttacctttcaccctgcttgtgttattcta
gtggcattaactaacatacgaattgagacatcacgtttcagtaccaataatagagattcc
gtccctcgtgaaacgtctgtttatcctccttcaattcctgaagctcaacagacttcaagt
cttagtatcataatgaatgttcatggcagagttatgatgatcaaaattgaaaaggatgat
accaatgagtatcatcgaaaacttagtcttcccactgttttggtttccaattgtgaaaca
atatggtttccaaaggatacaaatttagaaaaaccacatttaactgcatccctttggttg
tattgcggatcacatggtatgaaggtatggctccctgtttttccaagagaaggtgatgaa
gctcatactttcatgtcgaggcggatcatgttgcattttccattgaataagttttatcct
cttgccattctgtttgatgatgctatcattcttggtgccgaaaatgatacgattttactt
ggaaatgacacaaattcaacaatttctcttccttattccacacttgaacgcactagttta
ttatttttgcatccaattttacgccagttaataaagcgtaatcttggcttccatgcttgg
gaaattgctcgtacctgcatgatgttaccttacttctcccatacattagaattgctttta
catgaggtactggaggaagaagcgacttcaacagaacccattcctgatgcattacttcca
tctattgttagtttcattcaggaatttcctgtatatcatcaaactattgggagatgtgct
cgtaaaacggaagtcgctctgtggccccatttgttttcaactgttggaagcccaagagcc
ctatttactgaatgtctcaactgtggagatttagatactgcagccacttatttacttatt
ttacaaaatcttgagcctccttctgtagcacagaatcacgctactcttcttttggatgca
gcattggaccaaacctatttcaatttggtaaaagaacttgttagatttttaaaaagaata
gatcctgatgatgctggtggccctagacaattaagtacaactaatccttcttatggtcct
gtatctcataaagtcgaagggccggaggatgaaatttcaatcttattagggaccttgcaa
gttcctcgaactagatccgcaagtgttcctataaagacaacatcttccccaaaagaaaaa
atatcgaacaatagcatcaatacaagtagtcatcggcccggagatgttacaaaaaataca
aatcaaaatcgaacccgcaaaacttcttcggggggatcaaaagatgccgataaatcatct
tctctagagtatttatcccctgatgagttttacattgatgttattttacagagacatgct
cgaaagctattgtcaaattgtagacttttcgaccttggaacttttgctgctcaactggat
tttcatacagtaacatggttaaaaaaggaagccaatcgtgcggcccgtcttgacaattat
ttacaagcattaaagaaaattcatgctgacttcaattggccttttcccattttctttcct
aactctgtgatggaaacagaaaatggcataaacacgacttcctcctcatcactcgttgcc
ccctctcaatctgaagacgagatatcttcatcatctggactccctcaagttcaagttgat
tcaggttatcaatctcggcctcccacggagaatggtagagaagtaggcggaggagagctt
ggaattctatccgaaaaaacaattaatgccatgctgagacctcatagtggttatagagaa
gatctgtctatagcaagtgaagacgtgagttctattgctggtggaattgaagataactcg
gttttagaagaatgggctaacaaatcagaatctatatcaaaaacagttttatcaaaaaat
gagaattttgttcagcaagatgtagaaaaaaaaggttcacctagatcagaagttcagttg
agatacttattacaaattatgatggaagccaattgtttagaaattgcttctttgatttct
gtggtacttaaggactatcttgccctgattcgcattgtcaacgcagcaaggagtccacct
aatgataaaactgtagtttcacgtttgtatcaaaatctgaaggctatagaagcatgggct
cagtctgaatgtcatggatacactccttttttcaatcgcatacaaccacaattaaatagt
ttaaaagcctttctccttcaaatgccacaagtaccaaatataccaaggcaatcatctgct
aattcaagcctcctgaaaggtggagcaaacaaacatcttaatttaaatcgctctttgtct
atgggtgactaccctaaggatcctggagtgaaaatagatttgtcaaaatattcaccttcc
aaaaaaagccactatgatgctactgagagtaatgatatcaaagaaaagggctcttcccca
tctgaggaaattgttgagttaccaacggttgatgaagatggctcctgcattatatcataa
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