Lepeophtheirus salmonis (salmon louse): 121121087
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Entry
121121087 CDS
T08214
Name
(RefSeq) contactin-like
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Pur_ac_phosph_N
Lectin_C
UL45
Motif
Other DBs
NCBI-GeneID:
121121087
NCBI-ProteinID:
XP_040571897
LinkDB
All DBs
Position
6:38600821..38605856
Genome browser
AA seq
1353 aa
AA seq
DB search
MGHLWIALITIALARSQDSYEDYGLTGNESPEGPTISDQFSVTDPPIKEFPTTSTSPRFN
FIDPFKERSRPQVDEFGNPIGEIHSVDTTKFELGEGIDFEEFQCPRNWVRYGSKCYKFTR
SPLKRWSDARLICQAYRHKDEDSADLASINTLAEHRFIASHLNRIDPQHRRWYISARQES
DNTWINQGDLTQMKNLQDYFIDSAEWGETSGNNYNKDYLVYEYSEKMGQWGFKPVFGDEE
YLYICEMPIDQVTYLMTDERTHQYGQPVGDPRFYEMGPVFIKQPNQTIFDVGSRSVKNDI
SLLCIAHGWPTPTYSWYSEFFSNDSYTEQKVDPLKDSRITISGGQLIINNPNSVTDRGKY
FCQASNKFGTIRSRSVTIAFGFIGEFILRRNYETGDINWGKSISCDPPQYFPLVKFYWNR
DYFPNYVEEDRRIMVSYDGNLYFSSVEKIDEGNYSCSVQSSVASSGRTGPFFRLKVSPHP
NYQQLRFPQNFPKIFPEAPVAGQYVRMECISFGYPVAHYNWTRKGSDIPKDALVTNHNRV
LIIPRVKVEDQGEYICRAYNDKLSISASVKLSIQSRPVFTISIGDLHVDEKDDVTWTCEA
FGIPDVKYKWLKNAKLLKTGDDKLAIEDRGRYEIKDNVLIIRQVSKRDQGMYECLAYNDL
DARYSSGQLRVLSFSPSFDKYPLEEKLFAAEGGNITIKCKPEGAPTPEFVWRKNGAKIGS
GGKYIIYKSGSLFIRRVNADDSAVFTCEASNEYGRAESTGRLIVKRGPSFQAGIKPKPLV
IVNKGSSVNLKCKAVADPLLDMAYSWSLNNLKIRFSEDEENYRLLSLQNAEGQRIGGLSW
LSELSDHQKLLQSSGQFLNHHSSYTKGTGNFNKFRRGNRDGYLKIYNISYAEAGKYICIV
DSAVGRITAESQVIIHGPPGPPGSVSAVSLSSKSGTIIWTDGAIYGSQIKYYRIEGRTRD
NSTFTTLKDYAEAQEITYLGRKPKVHGRRQYKIIDQLSPYSAYQFRVTAYNDLGLGEHSE
PSPIYNTLPDKPTKTPTNIRGGGGHTRDLTIKWDALSKQDQNGPGVFYRIYYRRTGIDPE
WDFQQKTLTDLGNINIYVINIQRKYFFTTYEVKIQVFNDLCQEPKCEGPISDPVEIYSAE
DLPQVAPTRVGARPFNSTAIRVTWLPISNNRDKIRGKLIGYRIKYWRRELEEISESQYLL
SRSLDPEAFIIGLIPNTYYWVRVMAYNSAGPGPESERFLERTFKLRPQKPPTAVQVTGIN
PSTIRVTWRYVAPSVEEEPLTGYKVRVWESDMDISQANDTVIYIGNPLDVEITDLTPGKV
YHLRVLAFSQGGEGKMSSPVWQFQMGDPDKLNG
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atggggcatttatggatagccctaattacgattgctctagcaaggagtcaagattcatat
gaggattatggcctgacaggcaatgaaagtcccgaaggtcctactatcagcgatcaattt
tctgtaacagatcctccaattaaagaatttcctactacatcaacttctccgagatttaat
ttcattgatccttttaaagaacgatctcgtcctcaagttgatgagtttggaaatccaatt
ggtgagatacattctgtggacacgacaaaatttgaactaggagaggggattgattttgaa
gaatttcaatgccctcggaattgggttcgctatggaagtaagtgctataaatttacaagg
agtcctttaaaaagatggtcagatgcccgtttgatttgtcaagcatatcgtcataaagat
gaggatagtgcagacttagcaagcattaacacgcttgctgaacatcgctttatcgcaagt
cacctaaatcgaattgatcctcaacataggcgttggtatatatctgctcgtcaagagagt
gacaacacttggattaatcaaggagacttaactcaaatgaaaaatcttcaagactatttt
attgattctgctgaatggggcgaaacttctggaaataattataacaaagattatcttgtg
tatgagtactctgaaaagatgggtcaatggggatttaaaccagtgtttggcgatgaggaa
tacttgtatatttgtgaaatgccaattgatcaggtaacatatttgatgaccgatgaaaga
acacatcaatatggccaacctgttggagatcctcgattttatgaaatgggccccgttttc
attaaacaaccaaatcaaacgatttttgatgttggttctcgcagcgtcaaaaatgatatt
tcactactttgtattgcacatggttggcccacaccaacttattcttggtacagcgaattt
ttttctaatgatagttacaccgaacaaaaagtcgaccctcttaaagattccagaattacc
atatctggcggacagttaatcatcaataatcctaactctgtgactgatagaggaaaatac
ttttgtcaagccagtaataaatttggtacaattcgttcaaggtctgttacaatagctttt
ggatttatcggtgaattcattcttcgaagaaattatgaaaccggagatattaattggggc
aaatcaatatcatgtgaccccccacagtattttccacttgtgaaattttattggaaccgt
gattattttccaaattatgtcgaggaagatagacggattatggtttcgtatgacggaaat
ttatacttttcttcggttgagaaaatcgatgaaggaaattactcatgctctgttcaaagt
tctgttgcaagctctggtcgaactggacctttttttagattaaaagtttctccacatcct
aattatcaacaactccgatttccgcagaattttccaaaaatatttcccgaagccccagta
gctggacaatatgttcggatggaatgtattagctttggatatccagtagcacattacaat
tggacaagaaaaggatcggatattccaaaagatgccttagtcacaaatcataatagagtt
cttatcataccaagggttaaagttgaagatcaaggggaatatatatgtcgagcatataat
gacaagctctcaatttcggcatctgtaaaactgagtattcaatcaagacctgtttttacg
atatcgattggagacttacatgtggatgaaaaagatgatgtgacatggacatgtgaagct
tttggaataccggatgtcaaatataagtggctaaaaaatgccaaactattgaagactgga
gatgacaaattggcgattgaggatagaggaagatacgaaattaaggataatgttctcata
ataagacaagtcagtaaaagagatcaagggatgtacgagtgtctggcttataatgatctt
gatgctcgatattcttcaggtcaattaagagttctcagcttttctccttcctttgataag
tatcctctggaagaaaaactttttgcggcagaaggtggaaatataacaattaaatgtaaa
cctgaaggagctccaactccagaatttgtttggcgtaaaaatggtgccaaaatcggttct
ggtggcaagtacatcatttacaaaagtggaagtttatttatcagaagagtaaatgcagat
gattctgctgtatttacttgtgaggcttcaaatgaatatggccgagcagaaagcaccgga
cgtttgattgttaaaagaggtccgagttttcaagcagggattaaacctaaaccgttagtg
attgtgaacaaaggatcaagtgtaaatttaaaatgtaaagcagtagcagatcctttgttg
gatatggcatatagttggagcctaaacaatttgaagatacgcttctctgaggatgaagag
aattatcgtttgttgtcgctacaaaatgctgaagggcaacgaattggaggactatcttgg
ttgagtgaattgtcggatcatcaaaaactattgcagtcaagtggacaatttctgaaccat
cacagttcatataccaagggaacaggaaatttcaacaaattcaggagaggcaatcgagat
ggatatttaaagatctataacataagttatgctgaagctggaaaatacatatgtatagtt
gattcagccgtaggaagaattactgctgaatcacaagttattattcatgggccacctggt
cctcctggatctgtttctgccgtttctttgtcctctaaatctggcacaattatttggaca
gatggtgctatttatggtagtcaaataaaatattatcgtattgaaggtcgtacaagagac
aattcaacttttacaactctgaaagactatgctgaggctcaggaaattacttatcttgga
agaaaaccaaaggttcatggtcgtcggcaatataaaattattgatcaactatctccatat
tctgcatatcaattccgagttacagcatataatgatcttgggctaggtgaacattctgaa
ccatcaccaatatataacacactgccagacaaaccaacaaaaacaccaacaaatatacga
ggaggcggaggacatacgagagacttgaccataaaatgggacgcactatcgaagcaagat
caaaatgggcctggagttttttacaggatatattatagaagaactggaatcgatcctgaa
tgggatttccaacaaaaaacacttacagacctcggaaatattaatatttacgttattaat
atccaaagaaaatattttttcacaacttatgaagtaaaaatacaagtttttaacgatctt
tgccaggaacctaaatgtgaaggtcctatttcagatcccgtagaaatttattctgctgag
gatcttcctcaagtggctccaactcgagtaggtgccagacctttcaattcaactgcgata
agagtcacttggcttccaatatccaataatagagataagattcggggtaaactaattggc
tacagaataaaatattggagaagagaattagaagaaatatctgaatcgcaatatctttta
agtcgttctctggatcccgaagcttttattattggtttaatacctaatacatattattgg
gttcgagtaatggcctataactcagccggccctggtcctgagtcggagagatttttagaa
agaacttttaaattaagacctcagaagccgccaactgccgtacaagtaacaggaatcaat
ccttcaactatacgtgtcacatggcgatacgttgctccttctgtcgaggaagaacccttg
acaggttacaaagtcagagtctgggagtcagacatggatattagtcaagccaatgacaca
gttatatatattggcaatcctcttgacgttgaaattacagatttaactccaggaaaagtc
taccatcttcgagttttagcattttctcagggtggagaggggaaaatgtcctctccggtt
tggcaatttcaaatgggtgatcccgataaattaaacggctaa
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