Lepeophtheirus salmonis (salmon louse): 121121232
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Entry
121121232 CDS
T08214
Symbol
SmD1
Name
(RefSeq) probable small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121121232 (SmD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsm03041
]
121121232 (SmD1)
03032 DNA replication proteins [BR:
lsm03032
]
121121232 (SmD1)
Spliceosome [BR:
lsm03041
]
Complex A
U1 snRNP components
Sm proteins
121121232 (SmD1)
U2 snRNP components
121121232 (SmD1)
Complex B
U1 snRNP components
121121232 (SmD1)
U4/U6.U5 tri-snRNP components
121121232 (SmD1)
Complex C
U2 snRNP components
121121232 (SmD1)
DNA replication proteins [BR:
lsm03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
121121232 (SmD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Gemin7
YomU_Tube
SM-ATX
Hfq
Motif
Other DBs
NCBI-GeneID:
121121232
NCBI-ProteinID:
XP_040572052
LinkDB
All DBs
Position
7:16435677..16437289
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AA seq
134 aa
AA seq
DB search
MKLVRFLMKLSHESVVIELKNGTQVSGTIVGVDVAMNTHLKNVKMTIKNRDPVNLDSLSI
RGNNIRYYILPENLPLESLLIDDGPKRKTDKGRGRGRSGAGRPGAGGRPGARGRGRGRGG
PRGRGRGGPGGRPR
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgttcggtttttgatgaagttgagccacgaatctgtggtgatcgagcttaag
aatggtacgcaagtatctggaaccatcgtcggtgtggacgtcgccatgaacacgcatttg
aaaaatgtcaaaatgaccatcaaaaatagagatcctgtaaatttggactctctgagcatt
cgtggaaacaatatacggtactacattttaccggaaaatcttccacttgaatctcttctt
attgatgacgggccaaagcgtaaaacagacaaaggtagaggacgaggacgttcaggagca
ggaagaccaggtgctggaggtcgacctggagctagaggacgtggtcgagggagaggaggt
cctcgtggacgcggtagaggtgggcctggcggtcgccctcgctaa
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