Lepeophtheirus salmonis (salmon louse): 121121260
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Entry
121121260 CDS
T08214
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121121260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsm03021
]
121121260
03036 Chromosome and associated proteins [BR:
lsm03036
]
121121260
Transcription machinery [BR:
lsm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121121260
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
121121260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
zf-C2H2
HMG_WDHD1
zf-C2H2_4
CHDNT
MBD
zf-met
Motif
Other DBs
NCBI-GeneID:
121121260
NCBI-ProteinID:
XP_040572089
LinkDB
All DBs
Position
7:8551458..8564389
Genome browser
AA seq
2059 aa
AA seq
DB search
MSAHLFNESGQMQEVEIPDIFDVLEGGEDENAVKFLLGFSGEEEGTGSTPGSNVIVTQNN
VVLHPAPANPSGGVLVSLAPSAASAVMKGNEEDEDMVEALAGVTGGGIRKRDTSGLRAIY
SCDSCGKSFTTKFNLKRHINMHCHKSKEAGVPIQGPPSASAPSRKKSTGTQGRPPGSTNH
HNNLIKPLNQNNNDSTSNKSVIDKLVHNLTPVVQENPSVVSPTTVLSPIVTQEVSQAQLT
NTNVIKVPGPSAIQLPQQPVPITIMNNNHTKMNGSNISSTPSHNGLDNSQLVNVIANTNH
LLRNTSIPAIVSSITISGGPNNAVVTTIIPTGFNTISTTCMANTATTTTTSMTPGVVSSS
IPSTSLIIDPSSEFNALPSELFEGSDNSLLSHQSPPPSPSSSLDSAPLSHKIHGDEEEEE
EDETGGDMFEDSELDEEIASWQQQQQQNLSLDPASSQQQNLSLDPSSSHQQNHYHTTTTT
TLSQVVAPDPVIELLPLTTIPSGWIRKVIDVTPELQQSARNAPGGNEWRTMKVLYFNGAG
MKFEGYQELEKYFARLGYSLSHPEIFDFETEINSFDNFRCNGDMGPKRQYDNLNNGDDDE
KIHETGRKRRKIDPQQQIICLYEFIRRFKKEDGSELCENFIRVPKRRTDPGYYDVVTVPM
DLLRIQQKLKTDEYETLDEFVSDFELVIKNSLAYYKNGTREYKDATDMEELFNKALEKIL
AGENPSDSLGTREEPHNEAGVLIEMLEDLLAVVMTAIDPFDPNRLVHIPFRLLPSQKRYP
EYFKVINDPIDLKMIATKIQTTSYTTLSELEDDLIKMCRNAMTFNEPGSQIYRDAKQVLK
LTKSKRYELEANKVARENRGSRSTRRITSKKRFSAEIAALNYEDSEEEEDGEEEEDDVTH
QDDPLWDLYIHIRGFTTPSGVNLAEPFFTLPSKRELPDYYQTIMEPISLNMIRKKMKAGE
YAQLVDLADDLNTMFENCKTYNRPDSRLFKEGQKLQKIMHAKLEELEAREDEEDEVEEDE
EGESSRLDESGNSLEGRPRSQRANTRKRMRSLYNAVLNFKTEDELSLVGMFMEKPSKKDY
PDYYEIITNPIDMSMIDAKIKTGVYKSEEDVIQDMKLMFINCRRYNEEGSDIYKDANLLE
KVLVTKAREMGINAGPGRGRPRKKNLTLSQKLKILFETLRDYKDHKGRQLSLIFLRLPNL
REFADYYETIKKPIDFEKISGKMKQNAYESVEEALRDFILMFDNACKYNEPDSQIYKDAI
TLQSLALKTVRGMTDESSASISKIPNIGLAVRDILRSIFYNTYEHADEDERRYSDSLGEL
PSYDEEGPGAKVSRPPMSLELIKRRVDKGFYKRLDVLQKDVFSAFDRARSLTRTDSQIFE
DSVELHKFFIKSRDEVCQNGDILQSRALLYTEADFLKALEKLKKEKSATEEPSPPDYISP
DDEDDGTRVSFNNQEYRAGDFVYIEEGIYLIESIQGETFTGNRFYRPSETYHVPTRKFIE
HEVFQSDLRKTISFTEIVGKCWIMPIKDFLRYKPQGFDESDVYVCESRYNTRLRSFKKIY
KNYWMIPDNLMLGMRQEPLQLKRVSEAEHPPLPEEIPLNPPPPNVVWNFPPGTALPQNPI
SDGGLTYFEQYTIPGPITLKRGDSVYVRAENGKNLIVQIDSMWTNAEGMAYFYGAWYVTP
SEVPHNPTQMFYKREVFLSTISDINPLLSVVGKCCVMDASDYIIGRPTSYVETDVYVCES
VFDETKRVIRSSLPNGGGLKRYEYSSLVTNDELFYFKKPILLQKEASPLLPKVNCEPSVD
TEDSLDYRSLDSPDNDGSPYGRRSSKLTPKKIVTAYTLFSSEVRKQITEQNKDCSFGQIS
RMVGDKWRRLSDTEKQFYEYRAKKINDESAAKTLRDGSDDRSVHSLDRADSEQILFSPSS
ESFNNVSPTSTATKVALKSSVPQMNGNSLPPSTVIAACAVTNTVVKTTEPIFHSVPPRPQ
KLLHSEAYIKYIEGLTTDSSTISNWDKQLCASKDNTKTDEAKLPAHWLSDNGDHGTSLDA
LWALREFMMTDHLGLYKIC
NT seq
6180 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccacttgttcaacgagagtgggcaaatgcaagaggtagaaatacctgacata
ttcgatgtcctcgaaggaggggaagacgaaaatgctgtcaagtttctcctgggattttca
ggagaagaggaaggaactggaagcacgcctggatccaatgtgattgtgactcaaaataat
gtcgttcttcatccagctcctgccaatccctcgggaggagtccttgtctcccttgcaccc
agtgcagcaagtgcagtcatgaaaggtaatgaagaggatgaggacatggttgaagctctg
gcaggggtcacaggtggtggtattcgcaaaagagacacttctggcctacgagccatctac
tcttgtgactcttgtggaaaaagctttactacgaaattcaatctaaagcgacacataaac
atgcattgccataaatccaaagaggctggtgttcccattcaaggacctccttccgcatca
gctccatcacgaaaaaagtccacagggactcagggtcgaccccctggtagtacaaatcat
cacaacaacctcattaaaccactgaatcaaaataacaatgactctacgagtaacaaatcc
gtgatagacaaactagttcataatttaacaccggttgtgcaagaaaacccatctgtggtg
tctcctactacagtcctctcccctattgttacacaagaggtgtcccaggctcagctcacg
aatacgaacgttattaaagttcctgggccctcggccattcaactccctcagcaacccgtt
cccatcaccatcatgaataacaatcataccaaaatgaatggatccaacatcagcagtact
ccttcgcataatggcttagacaatagtcaattagttaatgttatagccaatacgaatcat
ttactacgtaacacttccattccagctattgtttcatccatcactattagtgggggtccg
aacaatgcagtggtgaccacaatcattccaactggtttcaataccatctccaccacatgc
atggcaaacactgctactactaccactacatccatgactcctggagtcgtttcatcctct
attccttctacctctctaatcattgatccctcttcggagttcaatgctttaccctcagaa
ttattcgaaggctcggataatagtttattatcccatcagtcccctcccccttcaccttca
tccagtctggactctgctcctctgtcccataagattcacggcgatgaagaagaggaggag
gaggatgaaactggtggagatatgtttgaggactctgagctggatgaggaaattgcttct
tggcagcaacagcagcagcaaaacctttctttagatcctgcatctagtcagcagcaaaac
ctctcattagatcctagttctagtcatcaacaaaaccactaccataccaccactacgacc
acgctttcacaggttgttgctcctgatccagtaattgagcttcttccactcacaaccatt
ccatcggggtggattcgaaaagtcatagacgttactccagagcttcaacaaagtgcaaga
aatgcacccggcggaaatgagtggagaaccatgaaagtactctactttaatggagctgga
atgaaatttgagggctatcaagagcttgaaaaatattttgcccgtttgggatattctctc
tctcatcctgaaatcttcgattttgaaacggaaattaactcttttgataattttcggtgt
aacggcgatatgggcccaaaaagacaatatgataacttgaataatggagatgatgatgaa
aaaatacacgaaactggtcgtaaaagacggaaaatagatccgcaacaacagataatatgc
ctctatgaatttatacgacgcttcaaaaaggaagatggctcagagctttgtgaaaatttc
atacgggtccccaaaagaagaacagatccaggctactatgatgttgtgactgtacccatg
gatctcctacgaattcaacaaaagctgaagacagatgaatacgaaacactcgatgagttt
gtttcggattttgaactagtcattaaaaactctttggcctattataaaaatggaactaga
gagtataaagatgcaactgacatggaagaactttttaataaagctctagaaaaaatactg
gcaggggaaaatccatccgactcattgggaacaagagaagagccgcacaatgaggctgga
gtccttatagaaatgttggaggatttattagctgttgtcatgaccgccattgatccattt
gatccaaatcgtcttgttcatataccttttcgacttttaccttctcaaaagagatatcca
gaatattttaaagtcattaatgatcccatcgatttaaaaatgattgcaaccaagatacaa
accacatcctatacaacgcttagtgaactagaagatgatttaattaaaatgtgtcgtaat
gctatgacatttaatgaaccaggttctcaaatttatcgagatgcaaaacaagttcttaaa
ctgactaaaagtaaacgctatgaattagaggccaataaggtagcacgagagaatcgtgga
tctcgtagcacacggagaataacttccaaaaagagattttcggctgagattgctgctctg
aattatgaggatagtgaagaggaggaggacggagaagaagaggaagatgatgtcactcat
caagacgatcctctatgggatttgtatattcatattaggggttttacaacaccatctggg
gttaaccttgccgaacctttcttcacccttccatccaaaagggaactgccagactactat
caaaccattatggagcctatttctttgaatatgattcgtaagaaaatgaaagctggtgaa
tacgctcaattagtcgaccttgctgatgatctcaataccatgtttgaaaattgcaagacc
tataatcggccagactcacgcctctttaaggaaggacaaaaacttcaaaaaataatgcat
gccaaattagaagaattagaagctagagaggacgaagaggacgaagttgaggaggatgaa
gaaggagaatcatcccgtcttgatgaaagtggtaattctttggaaggtcgaccacgtagt
caaagagcaaacacgcggaaaagaatgaggtctctttataatgccgttttaaactttaaa
acagaggatgagttgtcccttgttggcatgtttatggaaaaaccaagtaaaaaggattat
ccagattattatgaaatcattacaaatccaattgatatgagtatgattgatgctaaaatt
aaaacaggtgtttataaatctgaagaggatgtaatccaggatatgaaactcatgtttatt
aactgtagaagatataatgaagaaggatctgatatttataaggatgcaaatttacttgaa
aaagttctagtcacaaaagctcgagaaatgggcatcaatgcaggtcctggtcgaggaaga
cctcgaaagaaaaatttaacacttagtcaaaagttaaagattcttttcgaaacccttaga
gattataaagatcataaaggacggcagctctctcttatatttcttcgcctgccgaatcta
agagagtttgccgactattatgaaactattaaaaagccaatcgattttgaaaagatatct
gggaaaatgaaacaaaatgcttatgagtctgttgaagaagcactaagagactttattctt
atgtttgacaatgcctgtaagtacaatgaacctgactctcaaatatacaaggatgccata
actttgcagtcccttgcacttaaaacagttcggggtatgacagatgaatcatctgcatca
atatccaaaattcctaacattggcttagcagtgagggatatacttagaagtattttttac
aatacctatgaacatgctgatgaagatgaacgaaggtattcagattctttaggtgagctt
cctagttatgatgaagaaggacctggagctaaggtttcgaggcctccgatgagcttagaa
ttaattaaaagaagagtagataaaggtttttataagagactagatgttctccagaaagat
gtattttcagcttttgacagagcaaggagtctcacaagaacggattcacaaatttttgag
gactctgttgagcttcacaagttttttattaaatctagagatgaagtttgccaaaacggt
gacattcttcagtcacgtgcacttttatatactgaggctgactttttaaaagcactggaa
aaattgaaaaaagaaaagtctgcaactgaagagccttcaccacctgattatatatctcca
gatgatgaggacgatgggactcgtgtctcttttaataatcaagaatatagagcaggagac
tttgtttatatagaagaaggtatttacttaatagaatcaattcaaggggagacctttact
ggaaatcgtttttatcgaccctccgagacttatcatgttcctactagaaaatttattgag
catgaagtctttcaaagtgatttgagaaaaacgatatcctttacggaaattgtagggaaa
tgttggatcatgcctataaaggactttctacgttataagccacaaggttttgatgaatct
gacgtttacgtctgtgaatctcgatataatacacgacttcgatcctttaagaaaatttac
aaaaattattggatgatccctgacaatcttatgttgggaatgcggcaggagcctcttcaa
ttgaagagagtctctgaagctgaacacccccctcttcctgaagagattcctttgaaccct
ccccctccgaatgttgtatggaactttccgcctggtacagctctacctcaaaacccaatt
tctgatggagggttgacctactttgaacagtacacgatacctggacccattacgctcaaa
agaggtgacagcgtttatgtcagagctgaaaacggtaaaaacctcatagtacaaatcgat
tccatgtggaccaatgccgagggaatggcctatttctatggggcttggtacgtgacacca
agtgaagtacctcataacccgacacaaatgttctataagagagaagtctttctatcaaca
atttcggatattaatcccctactctcagtcgttggtaaatgctgtgttatggatgcgagc
gattatatcattgggcgtccaacatcctatgtagaaaccgatgtctatgtttgtgagtcc
gtattcgatgaaaccaaaagggttattaggagttctcttccaaatggaggtggccttaaa
cgctatgaatattcctctttagtcactaacgatgaattattttatttcaaaaaacctatt
ttgctgcaaaaggaagcatctcccttacttccgaaggttaattgtgaaccaagtgtagac
actgaggattcacttgactatagatccttggattctcctgataacgatgggtcgccctac
ggtcgaagatctagtaaattaacgccaaagaaaatcgttactgcctacactcttttttcg
agtgaggttcggaaacagatcactgaacaaaataaagactgttccttcggtcaaattagt
cgaatggttggggacaagtggagaaggctttcagacacggagaaacagttttacgagtat
agagccaaaaaaatcaatgatgaaagtgcagcaaaaacactgagggatggaagtgatgat
agatccgtacattccttggacagagctgacagtgaacaaatcctatttagtccttcatct
gagtccttcaacaatgtaagccctacgtcaacagccacgaaggtcgctttaaagtcctct
gttccacaaatgaatggaaattcccttcctccctccaccgtcattgcggcatgtgcagtc
acaaatactgtcgtcaaaacaacggagcccattttccacagcgttccacctcgaccgcag
aaacttcttcattcagaagcatatattaagtacattgaaggactcacaacagatagttcc
acgatttccaactgggataaacaactctgcgcctccaaggataacacgaaaacagatgaa
gccaagctacctgctcattggctctctgataacggggatcatggaacttccttagatgca
ctatgggcccttagagaattcatgatgacggaccatttaggtctttacaaaatatgctaa
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integrated database retrieval system