Lepeophtheirus salmonis (salmon louse): 121121261
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Entry
121121261 CDS
T08214
Symbol
Shc
Name
(RefSeq) SHC-transforming protein 1
KO
K06279
SHC-transforming protein 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121121261 (Shc)
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Gene cluster
GFIT
Motif
Pfam:
PID
SH2
Motif
Other DBs
NCBI-GeneID:
121121261
NCBI-ProteinID:
XP_040572093
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Position
7:complement(8564704..8569319)
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AA seq
702 aa
AA seq
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MGSIAYMTLEDRGFYSDESFLIQKAAELPLKDPSRSFNENNTKAKHPQTPLPHSRGNNQS
RSKNNNCTRSSFSNILQHVIHKLHDHRRKSTPRFSKEVTSASEQVTHSSSSTSSSSSEIC
VPCELLGDTQRRRSLTRRLFKDFKKATSAASSSTNDGSTSPPAPTIGGSAKSSSPPSRNS
PSNLSFSLSTESLEDRLRFSQLNELTRQTRSLERNHRHLVDIDSSCRYSREVGSTQVSVD
LPRPSLGRSSSSIDFNLRYQPDPTSACKKIIPPPPPITTTTTTPKTTSKRMSLRSSNLNI
VSKPARGWLHPDILFVQDGINFAVQYIGSLKVNTSMKVLDFDTRSAIAKECINRVCEAAG
RQVSDNKRTTDPNVTRMLDDSPNMERSGSSFQLTVTSLWLKLSDYDTGKAVLTHIMPNIS
FASGGDADTSNYVAYVAKDKTHGGTRSCYVIECTGGRAQEVITTIGQAFELRFKEYLKRA
PPIKQQHSVKSMQSQGNSSKSDDVEYYNDLPGKKPPLEPRESMVSASNNLIDFNTEIGPS
VKSEPEYINGDVVNASREEKLKVRDPFDMSPFPANSSSLPSPVTPQLPTSCAARGGGSGD
IVSEVWFHGPISRKESEILLQKDGDFLVRESLGSPGQYVLTGMQNNSKKHLLLVDPQGIV
RTKDRSFDSVSHLVNHHLDNGLPIISAESTLRLLFPVYRYQT
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgggctcaatagcttatatgaccctggaggatcgcggattctatagtgatgagtccttt
ctcattcaaaaggctgcggagctaccccttaaagatccctccagatcctttaatgagaat
aacacaaaggccaaacatccgcaaaccccattaccacactcaagaggaaacaatcagagt
cggagcaaaaacaacaactgtacgcgttcctccttctccaatatccttcaacacgtcatt
cacaaactacacgaccatcgtcgaaagtcaacccctcgtttctccaaagaggtcacgagt
gcatcggagcaagtcactcactcttcttcctcgacatcttcttcctcgtcagagatttgt
gttccttgtgaactattaggtgatactcaaagacgacgttctcttacgagacggctcttt
aaggattttaaaaaagcaacttctgcggcttcttcttccaccaacgacgggagtacttca
ccccctgcacctacaattggagggagtgccaaatcctcttctccacctagtcgaaattct
ccatccaatctatccttctcactctccaccgaatctctcgaggatagacttcgctttagt
caattgaatgagctaactcgtcaaacaagatctctggaaaggaatcacagacatcttgtg
gatatagattcctcatgcagatattctagagaagtgggaagtactcaagtcagcgtggac
ttgcctcgaccctctttgggacggtcgtcttcttcgatcgatttcaatctgagatatcag
ccggatcccacctccgcctgtaaaaaaatcattcctcctccacctccaataactactact
actactacgcctaaaactacctccaagaggatgtccttgaggagcagtaatttaaacatt
gtcagtaagcccgctaggggatggctccatcccgatattttatttgtgcaggacggcatt
aactttgctgttcaatatattggttccttaaaagtcaatacttctatgaaggtattggac
tttgatacacgatccgccattgcaaaagaatgtattaatcgtgtgtgtgaagctgctggg
cgtcaagtttctgacaataaacgaacaacggatcccaatgtgactcgaatgttggatgat
tctcccaatatggaacgatctggctcatcctttcagcttactgttactagtctatggctt
aagttatctgattacgatacgggtaaagctgtcttaacccatatcatgcccaatatttcc
tttgcttctggtggggatgcagatacgtcaaattatgttgcctatgtcgcaaaagataaa
actcatggggggactcggtcctgttatgtcatagagtgcacgggtggtcgtgcccaagag
gttatcacaactattggtcaagcttttgaactacgttttaaagaatatttgaagagagct
cctccgatcaagcaacaacattctgttaaatccatgcaatcacaaggaaatagttccaaa
tccgatgacgtagagtattataatgacttaccagggaagaaaccacccttggaacccaga
gagtccatggtgtctgcgagtaacaatctcatcgatttcaacactgaaatagggccttca
gtcaaatctgagccggaatatattaacggagacgttgtcaacgcaagtcgggaagagaaa
ttgaaggttcgcgatccattcgatatgagtcccttccctgcgaactcatcatcccttccc
tctcctgtgacaccccagctccctacgtcatgtgctgctcgaggtggtggcagtggtgat
atagtttctgaagtatggtttcatggacccattagtcgaaaggagtctgagattcttctt
caaaaagatggtgacttcctagtacgcgagtctctcggatctccaggacaatatgttctc
acagggatgcagaataactctaaaaaacatcttttacttgtggaccctcagggcatagtt
agaacaaaagacaggagttttgactctgtaagtcatttagtgaatcatcaccttgacaac
ggactacccatcatatctgcggaatccacgctacgacttttatttccagtctatcgatat
caaacataa
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