Lepeophtheirus salmonis (salmon louse): 121121333
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Entry
121121333 CDS
T08214
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsm01009
]
121121333 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121121333 (HDAC6)
04131 Membrane trafficking [BR:
lsm04131
]
121121333 (HDAC6)
03036 Chromosome and associated proteins [BR:
lsm03036
]
121121333 (HDAC6)
Enzymes [BR:
lsm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
121121333 (HDAC6)
Protein phosphatases and associated proteins [BR:
lsm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121121333 (HDAC6)
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121121333 (HDAC6)
Membrane trafficking [BR:
lsm04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
121121333 (HDAC6)
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
121121333 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
121121333
NCBI-ProteinID:
XP_040572153
LinkDB
All DBs
Position
7:13230531..13233961
Genome browser
AA seq
912 aa
AA seq
DB search
MSSLRDIMAKGRSKKNNKDVFQLPEDPYEGAYSVKSLPQSLSVGYVHDSIFDLHYNPWDE
DHIEKPERLIRIMERLKETRLLERCKQIPSRIAEEHEILEVHDESLIQLLKSSSQLNSSQ
EFKNFASKSFYSVFLNKDTYKVALTAAGSGLALSDALYSNEINSGIALIRPPGHHSMKKE
CNGFCILNNAALVAKSLLKKQGINKILIVDIDVHHGQGTQRTFIDNPNVLYFSIHRYEYG
NYWPHLRESNFTELGEGNGRGFNLNVPLNEIGMGDSEYISILHRILLPVAYEFQPDYVIV
SGGYDAAIGCPEGEMSVSPAFYGHLIKSLHALSMGRLLVILEGGYFIESLAEGVAMTVRA
ILGAPCVPLSLKSWKLSPSCVESILNVYTYSKAYWKQLNWMGKYNETNLKEDKLEHCFVP
NIDYLYERGTSDVVTPEGFEIGEDYYTLGPEKLKYFNDVISEERLRYSPFWEMDTIKVNY
VYDEIMMKHSNLDDSSHPECPNRIKNIFEMHDEFGLLKNMNKIQTERRITNEEILLVHGD
DHIKDLYELAQISSQEDREAFADQFESIFFNSHSHDCAHFAAGAFLDLIDSVLLSQDYER
ERKGGIAMIRPPGHHAEPEEFMGFSILNNVAIGAAYAKKKYGLKRILIFDWDVHHGNGIQ
KAFYDDPSVLYISIHRFDGGSFFPCKDDAGINFVGKGDGEGFNVNIPWDGPGVGDPEYLA
AFFQIVMPIAYEFEPELVLVSAGFDAAINDPLGHCKVSPQMYGHMTHHLSKLANGKVILA
LEGGYNLTSISLSMVMCTKALMSHPLPMPNTSKSLSERDTLTMQKVIEQHKNFWGCLSYL
SQKIPNTPDITIPDNLAISMGSLSLRSSILTDGIEYVPSEYGFHYSSSFVNTMSSSPSTM
KSATSCSSSNNN
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtttgagggatatcatggccaaaggtcgatcgaagaagaacaataaggatgta
tttcaactacctgaagacccatacgaaggagcatactccgtaaagtctctccctcagtca
ttatccgttggttatgtccacgattctatttttgaccttcattataatccctgggatgag
gatcacattgagaaaccagagaggctaatacggataatggaaagactaaaagaaacaaga
cttcttgagcggtgtaaacagattccttctagaattgcggaggagcatgaaattctagag
gttcatgacgaaagcctgatccaattgcttaagtctagttcacaactgaacagttctcaa
gaatttaaaaactttgcttctaaaagcttttattccgtatttttaaacaaagatacatat
aaagtagctcttacggctgctggaagtggacttgctctctctgatgctctctattctaat
gaaataaattctgggattgctcttatacgtccaccaggacatcattctatgaagaaggag
tgtaatggattttgtatactcaataatgcagcacttgtcgcaaagtccttactcaaaaag
caaggaattaacaaaatactcatagtagacattgatgtacatcatggtcaaggtacccaa
agaacttttattgacaatccaaatgttttgtatttctctattcatcggtatgaatatgga
aattattggcctcatctaagggagtcaaactttactgagcttggcgaagggaatggaagg
ggcttcaatctcaatgttcctctaaacgagattggcatgggagactctgaatatatatcc
attcttcatcgtattttactaccagtagcatatgagtttcaaccggactatgtcattgtt
tcaggtggatatgatgctgctattggatgcccggaaggagaaatgtctgtttctccagcg
ttctacggtcatttgataaaatctctccatgccttgtctatgggaagacttttagttata
ttggaaggaggatattttattgaatcacttgctgaaggtgttgccatgacagtgagagct
attttaggtgctccttgtgtaccactctcactcaaatcatggaaattatctcctagttgt
gttgaatccattcttaatgtatatacatattccaaagcgtattggaaacagttaaactgg
atgggaaaatacaacgagacaaatttgaaagaagacaaattagagcattgctttgttcct
aacattgactatctttatgagagaggaacgtcagatgtagtgactcctgaaggctttgaa
attggagaagattattatactctaggaccagaaaagcttaagtatttcaatgatgttatt
tctgaagaaagattgcgctattcaccgttttgggaaatggataccattaaagtgaactat
gtgtatgatgaaataatgatgaaacattccaatctggatgattcaagccatccagagtgt
ccaaatcgaattaaaaatatatttgaaatgcatgatgagtttggtcttttaaaaaatatg
aacaagatacaaacggaaagaaggattacgaatgaagaaattctattagttcatggtgat
gatcatattaaagatttgtacgaattagcccaaataagttctcaagaagatagagaggcg
tttgctgatcaatttgaatcgatattttttaattctcactctcatgattgtgctcatttt
gcagctggagcatttttagacttaattgattctgttcttttgtcccaagattatgaacgc
gaacgcaaaggcggtattgctatgataagaccaccaggacatcacgcagagcctgaagaa
ttcatggggtttagtattttaaacaatgttgcaataggtgcggcttatgcaaaaaagaaa
tatggcctcaaaaggatacttatttttgattgggatgttcatcatggaaatgggattcaa
aaagcattttatgatgacccatctgttctatatatttccatacatcgctttgacggaggt
tctttctttccttgtaaagatgacgcaggcataaattttgtaggaaaaggagatggtgaa
ggatttaacgtcaacattccttgggatggacctggtgttggtgaccctgagtacctggct
gcattttttcaaattgttatgcctatagcctatgaatttgagccagaactagttctggtc
tcagccggatttgatgcagctatcaacgaccctcttggacattgtaaggtttctcctcaa
atgtatggacacatgacgcaccatttatccaagttggccaatggaaaagttatcctcgct
ctagaagggggctacaatttaacatcaatttctttgtcaatggtaatgtgtacaaaagct
cttatgagccatcctcttccaatgccaaatacttccaagtctctttctgagagggataca
ttaacaatgcagaaagttattgaacaacacaaaaatttttgggggtgcctatcctacctt
tcccaaaaaattcctaacactcctgatattactattccagacaatttagctatatccatg
ggcagcttatcactaagaagttcaatattgacggatggcatagagtatgttccatccgag
tatggattccattattcctcttcctttgtcaatactatgtcttcctctccatcaaccatg
aaatctgccacctcatgttcgtcttcgaataataactga
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