Lepeophtheirus salmonis (salmon louse): 121121337
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Entry
121121337 CDS
T08214
Symbol
Actn
Name
(RefSeq) alpha-actinin, sarcomeric isoform X1
KO
K05699
actinin alpha 1/4
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04517
IgSF CAM signaling
lsm04518
Integrin signaling
lsm04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121121337 (Actn)
04518 Integrin signaling
121121337 (Actn)
04519 Cadherin signaling
121121337 (Actn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121121337 (Actn)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsm04812
]
121121337 (Actn)
04147 Exosome [BR:
lsm04147
]
121121337 (Actn)
Membrane trafficking [BR:
lsm04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121121337 (Actn)
Cytoskeleton proteins [BR:
lsm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121121337 (Actn)
Exosome [BR:
lsm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121121337 (Actn)
Exosomal proteins of colorectal cancer cells
121121337 (Actn)
Exosomal proteins of bladder cancer cells
121121337 (Actn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAMSAP_CH
STB2_C
MIC21
Motif
Other DBs
NCBI-GeneID:
121121337
NCBI-ProteinID:
XP_040572156
LinkDB
All DBs
Position
7:16594904..16601588
Genome browser
AA seq
901 aa
AA seq
DB search
MTSANPQGFGAPMDPNDPNQYMEPEEEWEREGLLDPAWEKQQRKTFTAWVNSHLRKAGTQ
IESIEEDFRNGLKLMLLLEVISGETLPKPDRGRMRFHMIANVNKALDFIASKGVKLVSIG
AEEIVDGNVKMTLGMIWTIILRFAIQDISVEEMTAKEGLLLWCQRKTAPYKNVNVQNFHL
SWRDGLAFCALIHRHRPDLLDYSKLSKDNPLDNLNLAFDIAERYLEIPKMLDAEDLLNTD
KPDERQVMTYVSCYYHAFQGAMQAEMAANRICKVLKVNQDNERLMEEYERLASDLLEWIR
KTLPWLESRQSGNSLIAVQKKLEEYREYRRKHKPPRVEQKAKLETNFNTLQTKLRLSNRP
AYMPSEGKLITDIQGAWNGLLGSEKGFEEWLLAELMRLERLEHLAKKFKHKADIHEAWTS
GKEEMLSSSDYKNCKIFELKAMKKKHEAFESDLAAHQDRVEQIAAIAQELNALDYWDSTA
VNSRCENICSQWDRLGSLTQQRRQGMDDAEKVLERVDSMHLEFAKRAAPFNNWLDGTRED
LVDMFIVHTLDEIQGLIDAHAQFKATLGEADKEFQSIITLVREVESFAKQYNVPGATINP
YTNLTGNDINSKWNEVKTLVPQRDQTLEDELRKQQNNEQLRRQFADKSNQVGPWIEKQMD
AVSAIGMGVQGSLEDQLHGLREYEEAVYQFKHNLEELERINQQIQESFVFENRYTQYTME
TLRVGWEQLVTSVNRTINEVENQILTRDSKGITQEQLNEFRASFNHFDKSRSGRLAPDEF
KSCLISLGYSVGQDKQGEIDFQRILSIVDPNNSGYVQFDCFLDFMTRESTDVDTAEQVID
SFRILAADKPYILQEELRRELPPDQAEYCIQRMQVYSGIDSVQGGLDYMSFSTALYGESD
L
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctgcgaacccgcaaggtttcggtgctcccatggatcccaatgatcctaaccag
tacatggaacccgaagaagaatgggagagagaggggcttctagatcctgcatgggagaag
caacagagaaagacatttacagcttgggtcaattcccacttgaggaaggctggaacgcaa
attgaatcgattgaagaagactttcgcaatggtcttaaactcatgcttttattggaagtc
atttcgggtgaaactctccccaagcctgatcggggtagaatgaggtttcacatgattgcc
aacgtgaataaagctttggactttattgcaagtaaaggtgtaaaattggtttctatcggc
gcagaagaaattgttgatggcaacgtcaaaatgactcttggtatgatttggaccatcatc
cttcgttttgccattcaagacatctctgttgaagaaatgacggccaaagaaggtctccta
ctctggtgccaaagaaaaactgccccctacaagaacgttaatgttcaaaacttccatctt
agttggagggatggtttggcattctgtgctctcatccaccgtcaccgtcctgatcttttg
gattactctaaattatctaaagacaatccattggataatcttaatcttgcttttgatatt
gctgagagatatcttgaaattccaaagatgttggatgctgaagatttgttaaataccgat
aagcctgatgaacgtcaagttatgacatatgtatcgtgttattaccacgcgttccaaggg
gctatgcaggctgaaatggctgctaaccgtatttgcaaagtcttgaaggtcaaccaggac
aatgaaagattaatggaggaatatgaaagattagctagtgatcttctagaatggattagg
aaaaccctcccttggcttgagagccgtcaatccggaaattccctcatagcagtacaaaag
aaacttgaggaatatcgtgaatacagacgaaagcataagcctccacgtgtggaacaaaaa
gccaaattggaaacaaactttaatacactacaaaccaaattacgcctctccaataggcct
gcatacatgccatctgaaggcaaacttatcacagatattcaaggagcttggaatggcctt
ttaggttcagaaaaagggtttgaagagtggttattagctgaattaatgcgtcttgaaaga
ctcgaacatctagctaaaaagttcaaacacaaggctgatattcatgaggcttggacctct
ggaaaagaggaaatgttgtcatcatcagactataagaactgtaaaatctttgaattgaag
gctatgaagaagaaacatgaagcttttgaaagtgatttggcggcacatcaggatagagtt
gaacaaattgcagccattgcccaggaactgaatgctttggattactgggactctactgcc
gttaattcaaggtgtgaaaatatttgtagccaatgggatcgattgggatctctcactcaa
caaagacgccagggcatggatgatgctgagaaggttttggagagagtcgattctatgcat
cttgagttcgctaaacgcgctgcaccattcaataattggctcgacggaaccagagaagat
ttggttgacatgttcattgttcatacgttggatgaaattcaaggattgattgacgcacat
gctcagttcaaagctactttaggagaagctgataaagaatttcaatcaattattacactc
gtcagagaagttgagagctttgccaaacagtataatgttcctggagctactattaatcct
tataccaatttaaccggaaatgatattaattcaaaatggaatgaagtcaaaaccctggtg
ccccaaagagatcaaacccttgaggatgagcttcgcaagcaacaaaacaacgaacagtta
cgccggcaatttgctgacaaatcaaaccaagttgggccttggattgaaaaacaaatggat
gccgtatctgctataggaatgggcgttcaaggctctctggaagatcaattacatggactt
cgtgagtacgaagaggctgtatatcaattcaaacataatttggaggaattggagcgtatt
aaccaacaaatccaagagtcatttgtctttgagaatcgttacactcaatatactatggaa
accctacgtgttggatgggaacaattggtgacatcagttaacaggaccatcaacgaagtt
gaaaatcaaattttgacgcgagattccaagggaatcacacaagagcaacttaatgaattc
agagcatcattcaaccactttgacaagagtcggtctggccgactcgctccagatgaattt
aaatcctgtcttatctcattgggctactcagtcggacaagataaacaaggagagatagac
ttccaaagaattttgtcaattgttgatccaaacaatagcggttacgttcagtttgattgc
ttcctggacttcatgaccagagagtctacagatgtcgacactgccgaacaagtcatagat
tcatttagaattttagctgcagataagccttacattttacaagaagaactcagaagggaa
ctccctcccgatcaggcagagtattgtattcaaagaatgcaagtttattccggaatcgat
tcagtccaaggtggtctcgattatatgtccttctcaactgcattgtatggagaatccgat
ctttaa
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