Lepeophtheirus salmonis (salmon louse): 121121346
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Entry
121121346 CDS
T08214
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121121346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lsm03051
]
121121346
Proteasome [BR:
lsm03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
121121346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_22
AAA_2
AAA_5
RuvB_N
PRS7_OB
nSTAND3
Prot_ATP_ID_OB_N
AAA_14
AAA_11
DUF815
AAA_7
CENP-Q
NPHP3_N
AAA_33
RNA_helicase
Mg_chelatase
AAA_lid_PRS2_C
TIP49
AAA_3
AAA_18
Spectrin
AAA_28
ATPase_2
AAA_24
Csa3_N
TsaE
AAA_25
bpMoxR
AAA_30
Occludin_ELL
DUF5906
NACHT
HBM
IstB_IS21
Parvo_NS1
AAA_19
Motif
Other DBs
NCBI-GeneID:
121121346
NCBI-ProteinID:
XP_040572170
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All DBs
Position
7:20140070..20141862
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AA seq
392 aa
AA seq
DB search
MSAPTNPKEKALGDYRSKLKEHKEVEARLKEMRESLKELTKQYDKSENDLKALQSVGQIV
GEVLRQLSEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDP
LVYNMSHEDPGEVTYSNIGGLAEQIRELREVIELPLLNPELFLRVGISPPKGCLLYGPPG
TGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA
IGGRRFSEGTSADREIQRTLMELLNQMDGFDVLGQVKMIMATNRPDTLDPALLRPGRLDR
KVEIPLPNDQARLEILKIHAGPITKHGEIDYEAVVKLSDGFNGADLRNVCTEAGVLAIRA
EREYVLDEDFMKAVRKVSENKKLESKLDYKPV
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctcctacaaatcctaaagaaaaggcacttggtgattatcgatccaagctcaag
gagcacaaagaggtagaagcccgcctcaaggagatgcgcgaatccctcaaagagctaaca
aaacagtatgataaatctgaaaatgacttaaaagctctgcaatcggtgggacagatcgtg
ggagaagtgctgagacagttgagtgaagagaaatttatcgtgaaagccacgaatggacct
cgctatgtcgtggggtgccgtcgacaattggacaagagtaaattgaagcccggaacgcga
gtggcactcgatatgaccactttgactattatgcgctacctcccgcgtgaggtggatcct
ctagtttataacatgagtcatgaagatcctggtgaggtgacttattccaatattggaggt
ctggctgaacaaattcgagaactgagagaggtcatagaacttcccctactcaatccagaa
cttttccttcgtgttggaatctctcctcccaagggttgtctactctatggtcccccagga
acaggaaaaaccctccttgctcgcgcagtcgcttcacaacttgacgccaatttcctcaaa
gtcgtttcttcggcaattgtagataagtacattggtgaatccgctcgtctcattagagaa
atgttcaattatgctcgtgatcatcagccctgtatcatttttatggatgaaattgatgca
attggtggaagacggttctctgaaggtacttcagcggatcgggagattcaacgcacactc
atggagctcctcaatcaaatggacggctttgatgttttaggacaagtcaaaatgattatg
gctacgaaccgtccggacactcttgatcctgccctacttcgacctggtcgtttggatagg
aaagtagaaatccctctacctaatgatcaagcacgtcttgaaattctcaaaattcatgcg
ggacccattaccaaacatggtgaaattgattacgaagcggttgtcaaactcagtgatggc
tttaatggtgctgatttaagaaatgtttgcacggaagcgggtgttttagctattcgagct
gagcgcgaatatgttttagatgaagattttatgaaagcagttcgtaaagtctcagaaaat
aagaagcttgaatcaaaactcgattataagcctgtttaa
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integrated database retrieval system
