Lepeophtheirus salmonis (salmon louse): 121121386
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Entry
121121386 CDS
T08214
Symbol
HDAC4
Name
(RefSeq) uncharacterized protein HDAC4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsm03036
]
121121386 (HDAC4)
Enzymes [BR:
lsm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
121121386 (HDAC4)
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
121121386 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
RNase_E_G_Thio
Motif
Other DBs
NCBI-GeneID:
121121386
NCBI-ProteinID:
XP_040572213
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All DBs
Position
7:14695400..14731612
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AA seq
863 aa
AA seq
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MMKSNLPFDLIPEEDVPPKDSPPSSKSSPENRPSLALIKTQHLLHQQILDKRFGRNFELL
QQSQEKQLSQYIQQVELPRHRSNSTTSSPTNNATINASLGAGSPRDIDQKERHRLRFIKQ
KSLNDQSAVASPEVKKHLQEFVLQKKRKEASMVNLKSEILCSNASQSSSSTHHPILRKTA
SESNLLKMKSKRADIRSSVTPYARFGSHGPTQPVIPEGSVVHDSAPSSPQTTEDSTIGGS
PSSCSYSMSPHVPSNVVTTSTTPPTTSHHSHHSRYENSLRSTLVERNNLIIVGNEDSSIN
SKSLPNIPSAIGRAALINKAVGRRSPPTNMSNRLPHHPSMMVRRTKSSAILPLRKHLIEK
QRSADEEQYFQQKLNERFVRPTIVEEDSSNIFMDIDDGRRIHSLATSVRSSGISQLLLGD
LNPPSTGLGFDSIMLNHTCKCGNNAAHIENPSRASHIWNRLIEQGLVAHCKRISRKATLE
EIQSSHSENHTLLYGSDMISRKSTTSYGPKFSMLECGGIGVDSDTYWNENYTSEVLRTAV
GTLIEISEMVVNDELKNGFAIIRPPGHHAEYEEAMGFCYFNSVAITANRLLLSPNVTKVM
ILDWAIHHGNGTQKAFYDNPNVLYISLHRHDNGNFYPGTGSLTECGHGPGLGFNVNIAWT
GDLIPPMGDSEYLAAFRNIVMPIAREFNPDVVLVSAGFDAAIGHNHPIGGYHVSTACFAY
MTLQLQQIAGGKVVLALEGGYDLEVLSTASEQCVRALLKFPIEKISEAELARRPTAIAVE
TLQKTLAIQALYWNSLKGGCETAFLSHLEAWEKEREEADALSAMATLSMQQHRNSTSILA
EHNHLHQSSSHQPSSTPITISYY
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatccaatctgccttttgatttgattcctgaagaggacgtacctcccaaggat
tcccctccatcctcaaaaagttctcctgaaaacaggccctccttagctttaatcaaaacc
caacatctccttcaccaacaaatcttggacaaaagatttggtcgtaacttcgaattactt
caacaaagccaagaaaaacaattatctcaatatattcaacaggttgaacttccaaggcat
agaagtaattccacaacttcctcaccaactaataatgcaaccataaatgcatctcttggg
gctggatccccaagggacatagatcaaaaggagaggcatagattgaggtttattaagcaa
aaaagtttgaatgatcaaagtgctgttgcaagccctgaagtaaagaaacacctccaggaa
tttgtgcttcagaaaaagcgcaaagaggcctccatggtcaatttaaaatctgaaatttta
tgttctaatgcatctcaatcttcgtcctcaactcatcatcccattcttagaaaaacagcc
tctgaatctaatttattaaaaatgaaaagtaaaagagctgatataagatctagtgttaca
ccttatgcaaggtttggttcacatggtcctacacaacctgtcatacccgaaggatctgta
gttcatgattctgctccatcttcacctcaaactacagaggattctacaattggtggatct
cctagttcttgttcttattcgatgtctcctcatgttccttctaacgttgtcacaacatcc
acaacaccaccaaccacttctcatcactcacatcatagtcgatatgaaaattcacttcgt
tccacattagtcgaaaggaataaccttattattgttgggaatgaggacagctctatcaat
agcaaatcactccctaacatcccttctgccatagggcgagccgcattgattaataaagct
gtgggaaggagatctccacccacaaatatgtccaatagattaccccaccatccatcaatg
atggttcggagaactaaatcttcagccatattacctcttagaaagcacctaatagaaaag
caaagatcagccgatgaagagcagtattttcaacaaaaacttaatgaaaggtttgtgcgg
cccacaattgttgaagaagattcttctaacattttcatggatatcgatgacggtagaaga
atacactctttggctacaagtgttaggtcatcaggtatttcccagctcctcctcggagac
ttaaatcctccttctacgggattaggatttgattcaattatgctgaaccatacctgtaaa
tgcgggaataatgcagcgcacattgagaatccaagcagagcatctcatatatggaataga
ctaatcgaacaaggacttgtagctcattgtaaaaggatctctcgtaaggctactctggaa
gaaatacagtcttctcattccgaaaatcataccctcctatatggatcagatatgatctcc
cgaaaatcaactactagttatggtcccaagttctcaatgctcgaatgtggagggataggg
gtcgattctgacacctattggaatgaaaattatacttctgaagttcttagaactgcagtt
ggaactctaattgaaattagtgaaatggttgtcaatgatgagttaaaaaatggctttgca
atcattcgccctcctggacatcatgcagagtacgaggaagctatgggcttttgttatttc
aattctgttgccataactgcaaatagattacttctatcccctaatgttacaaaagtaatg
atccttgattgggctattcatcatggaaatggaactcagaaagccttctatgataaccct
aatgtcttatatataagtttacatagacacgataatgggaatttttatccaggaacagga
agtcttaccgaatgtggccatggtcctggtcttggatttaatgtaaacatagcttggacc
ggagatctaattcctccaatgggagattctgagtatttagctgcattcaggaatatagtt
atgcctatagcaagagaattcaatccagatgtcgtccttgtatcggcaggatttgatgca
gcaatcggacataatcatccgatcggtgggtaccatgtgtccactgcttgttttgcttat
atgacattacaacttcagcagatagctggtggtaaagttgttttagcattagaaggcggt
tacgatttagaagttttgtcaacagcatcagagcagtgtgtgagagcactattaaaattc
cctatcgaaaaaatcagtgaagcagaattagctcgacgacccactgcaattgctgttgaa
actctgcaaaagacacttgcaattcaagctctgtattggaattctctcaaagggggatgc
gaaacagcctttttgtcacatttagaggcatgggagaaagagagggaagaggctgatgcg
ctctcagccatggctactttatcaatgcagcagcatcgaaactcgacttctatacttgca
gaacataatcatctccatcagagctcatcccatcaaccgtcttcaactccgataactata
tcctactattag
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