Lepeophtheirus salmonis (salmon louse): 121121391
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Entry
121121391 CDS
T08214
Name
(RefSeq) spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121121391
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsm04812
]
121121391
Enzymes [BR:
lsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
121121391
Membrane trafficking [BR:
lsm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121121391
Cytoskeleton proteins [BR:
lsm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
121121391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_22
AAA_5
AAA_14
AAA_16
AAA_24
TIP49
AAA_28
Mg_chelatase
AAA_25
nSTAND3
IstB_IS21
AAA_2
RNA_helicase
AAA_33
AAA_18
ATPase
Motif
Other DBs
NCBI-GeneID:
121121391
NCBI-ProteinID:
XP_040572224
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Position
7:complement(15482925..15486321)
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AA seq
439 aa
AA seq
DB search
MSADLHVNEGNKWLSEALNLETSRRGSISVVLSYYRLGIRELESALALGTKDPRALRWLS
QAYDRVDYLGKCQEEQKKRSIYPSTNAVPSAPPMESGLSRRKLYDQELKNRNLRNYKSPQ
RPSSSLSSHSTSSSSSSSSQKPPSELETFILSTKTKPQKSDSGFSSIAGLKSIKTTLQEI
VILPSLRPDLFKGLRSPPRGILLFGPPGNGKTLLAKTLAAEGNMTLFSITASSLTSKYVG
EGEKLMKVLFELALQNSPSLIFIDEVDSILCRRKEGEHEASRRLKNEFFSSFDSIVGNDK
KRVLLIAATNRPQEIDDAALRRFTKKLFVPMPDNDTRKAVLTNLLSKNNSNLSEVELEIL
SGKVTKGYSCSDLTNLTKEAAFGPLRELSPEEITKVSPKDIRKIIIKDFEVALLKIRPST
NQSLLKTYEDWNKKYGDNS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagatcttcatgtgaatgagggtaataaatggctctctgaagctttgaatctt
gaaacttctcggagagggtccatatctgtggttttaagttactatcgactaggaatccgt
gaattggaatctgctcttgcattagggactaaagatccccgggctctacgctggttatct
caagcttatgatcgtgttgactatctgggcaaatgccaagaagagcagaaaaaaagatct
atctacccctctacgaatgcagttccttcagcgcctccaatggagtcgggcttgagtcgc
agaaaactctacgatcaagaattgaaaaatagaaatctgaggaactacaagtctcctcaa
cgaccctcctcgtcactctcgtcccattccacatcttcctcatcatccagttcgtctcag
aaacctccttcagaattagagacctttattttatcaacaaaaacaaaacctcagaaatcc
gactcggggttttcttcgattgcaggtctcaagtcaattaaaacaactcttcaagaaatt
gtgatattgccgagtcttcgtccggatttatttaaaggtcttcgtagtcctccaagaggc
atcctattatttggtcctcctggtaacggtaaaacactacttgccaaaacattggctgcg
gaaggaaacatgacgctcttcagtataactgcgtcctcattgacctctaagtatgttgga
gaaggtgaaaagttaatgaaagttctttttgaattggccctacaaaactctccatctctg
atattcatagatgaagttgattccatattgtgtcgtcgaaaggaaggagagcatgaagcc
tctcgtcgtttaaagaatgaattcttttctagttttgattccattgttggaaatgacaag
aagagagttcttctgatagcagctacaaatcgtccccaggaaattgatgacgctgctcta
aggaggtttacaaaaaaactatttgttccaatgcctgataatgatacaagaaaagctgta
ttaacgaaccttttatcaaaaaataattcgaacttatccgaagttgaattggaaattctc
agtggtaaagtaactaaaggttattcgtgtagtgatttgacgaatcttactaaagaagcg
gcatttggtcctcttcgagaactatcccctgaagaaattactaaagttagccctaaagat
ataagaaaaattatcattaaagattttgaggttgcattgctaaaaattagaccttctacg
aaccaaagcttgcttaagacctacgaagattggaataagaaatatggggataattcctaa
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