Lepeophtheirus salmonis (salmon louse): 121121400
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Entry
121121400 CDS
T08214
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm00061
Fatty acid biosynthesis
lsm00071
Fatty acid degradation
lsm01100
Metabolic pathways
lsm01212
Fatty acid metabolism
lsm04146
Peroxisome
Module
lsm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121121400
00071 Fatty acid degradation
121121400
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121121400
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lsm01004
]
121121400
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsm04147
]
121121400
Enzymes [BR:
lsm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121121400
Lipid biosynthesis proteins [BR:
lsm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121121400
Exosome [BR:
lsm04147
]
Exosomal proteins
Exosomal proteins of breast milk
121121400
Exosomal proteins of breast cancer cells
121121400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121121400
NCBI-ProteinID:
XP_040572244
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Position
7:complement(11704761..11707370)
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AA seq
717 aa
AA seq
DB search
MVRIVLGILKFVVRLWDFFTYPIYQVIYKPWKKRNNFGKLRSEIIEKTDSYVLIRSPEKE
NKLTIGLEGIMTMDKVWKWALQVYGERPILGSRSVLSMEDETQSNGKVFKKLELGSYHWK
SFRDCDIIVENFGRGLRHIGLCPKDKVAVYAETRAQGLLATLGAFSQNISIVTLYTNLGP
EGITHGINQTEAKCVISSNELLPKLLNLLPQLPNVNKVIVIPDHTSISNSQVPEVEVKIY
MFDELVDAGSNWKPVKSEPPQPEDIAIIMYTSGSTGVPKGVLLTHRNLVSTLISINSTID
IKTSSNDKYIAFLPLAHVLELLCEMMMVIRGIRIGYSSPNTLLDTSTMIKSGTHGDATVL
QPTLMTCVPLVLTRIYNGINQKMDTRGKLFKSIFRFFYDYRLKSIRNGLPTPVLNKILFG
KFHKLIGGKVKFIFAGGAPLSDEVHDFIRVCLGVDIIQGYGLTETTASATLMDSSDISTG
TAGAPNQCIDIKLVNWEDGNYKVTDQPRPRGEILIGGDCVSNGYYKIHEKTKEDFFEEKG
KQWFRTGDIGEVTELGTIKIIDRKKDLVKLQYGEYISLGKVESALTTCPVVDNICIYGDS
FKSNCVALIVPNKTVLGKWADQKLGMYSQTEIEHNSDAFSKCCQDERVITMVLEEVRLHC
SKNKLQRFEIPVAVYLCKENWSPETGLVTAAFKIKRRPIQEFYQKDLDQMYQSSRRL
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggttcgaatagttttgggtattctgaagtttgtggtccggttatgggacttttttact
tatccaatatatcaggtgatatataaaccttggaaaaaacgcaataactttggaaagctt
cgatccgaaattattgaaaaaactgattcctatgtcttgattcggagtcctgagaaagaa
aataagctaaccataggactggaagggatcatgacaatggataaagtttggaaatgggct
ttgcaagtctatggagaacgcccaattttaggaagtcgtagtgtcctatccatggaagac
gagacacaatctaacggtaaggtgttcaaaaagctggaattagggagctatcactggaag
agctttcgtgactgtgacataattgtggagaattttggaagaggacttagacatattggt
ttgtgtccaaaagacaaggtggcagtatacgcagaaactcgtgctcaaggtcttttagct
accctaggtgcattttcgcagaatatttcaatcgttactctttatacaaaccttggacct
gagggtattactcatggaattaatcaaactgaagctaaatgtgttatttcctctaatgaa
cttttgccaaaattattaaatctattgcctcaattacctaatgttaataaagtaattgtt
atacctgatcatacatcaataagtaatagccaagtacctgaagtggaagtaaaaatctat
atgttcgatgaattggttgacgctggctcaaattggaagcctgtcaagagtgagcctcca
caaccagaagatattgctattattatgtacacttcaggttctactggagtccccaaagga
gttcttctgacacacagaaatctcgtttctaccctgatatctataaattccacaatcgac
attaaaactagtagcaatgacaagtatatagcgtttttgcctttagcccatgtgttagaa
ctactgtgtgaaatgatgatggttataagggggataagaattgggtattcaagtccaaat
actcttttggatacctcaacaatgattaaatctggtactcatggagatgctacagtatta
caacctactttgatgacttgtgtcccacttgttctgactagaatttataacggcattaat
cagaagatggatactcgtggaaaacttttcaaaagtattttccgttttttttatgactat
cgcttaaagtctattcgtaatggtttaccaactcctgtactaaataaaattttgtttggg
aaatttcataagcttataggaggtaaggttaaatttatatttgcgggtggagctcctctt
tctgatgaagtgcatgattttatacgggtttgtttgggagtggatattattcaaggatat
ggacttacggaaactactgcatctgctacgctgatggatagcagcgacatttcaacggga
acggcaggtgctcccaatcagtgtattgatattaagcttgttaactgggaagacggtaat
tataaagtcacagatcagccacgcccaagaggagaaattcttattggaggagattgcgtc
tccaatggttactacaaaatacatgagaagacaaaagaagacttctttgaagaaaagggt
aaacaatggtttaggaccggtgatattggagaagttacagagttggggaccataaaaatc
attgatcggaaaaaagatttagttaagctccagtacggagaatacatatccttaggcaaa
gtagagtctgctctaacaacgtgtccagtcgtagacaatatatgcatctatggagattca
ttcaaatcaaattgtgtcgctctcattgttcccaataaaactgttcttggaaaatgggcc
gatcaaaaacttggaatgtattctcaaacagaaattgaacataatagtgatgcattttca
aagtgctgtcaagatgaaagggtaatcaccatggttcttgaggaagtgagattgcattgt
tcaaaaaataaattgcaaaggtttgaaataccagttgcagtatatttatgcaaagaaaat
tggagccctgaaaccggacttgtcaccgcggcctttaaaattaaacgcagacctattcaa
gaattttatcaaaaggatttagatcaaatgtatcaatcaagtagacgactttaa
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