Lepeophtheirus salmonis (salmon louse): 121121429
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Entry
121121429 CDS
T08214
Name
(RefSeq) LOW QUALITY PROTEIN: sorting nexin-27
KO
K17936
sorting nexin-27
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121121429
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsm04990
]
121121429
Membrane trafficking [BR:
lsm04131
]
Protein recycling
Others
Others
121121429
Domain-containing proteins not elsewhere classified [BR:
lsm04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
121121429
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
SNX17-31_F2_FERM
RA
SNX17-27-31_F1_FERM
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121121429
NCBI-ProteinID:
XP_040572290
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All DBs
Position
7:3076576..3083804
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AA seq
528 aa
AA seq
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MTSDPRSKKRILEPHVVHIDKTETGFGFNVRGQVCEGGTLKSINGELYAPLQHVSAVLEG
GAAEEAGVFKGDRILEVNGVNVEGSTHRQVVELIKSCGDSLTLTLISVSQEEADKLEPHS
EESQNNVQFIDYTXKRSLPISIPDFKFMEHDSEKFVVYNVYMAGRHLCSRRYSEFDTLHH
NLRREFLGFHFPKLPGKWPFVLSDQQLDTRRRGLEQYLERVCAVRVIAESDLMQEFLTES
DDQIGSTPMVDIKVMLPTKEILTIKVMRNSNTNEVFRVVIEATGLKPENYGYFALFEIVE
HNFERKVQPNEFPHSLYIANYSTAAATCLVVRKWIFEPDTERSLGNDPVALNFLFMQAIE
DVNRGYINTQDKLYQLKALQETNKKIEYLSLVRSMDGYGSVVFPHCPCDSKKEGHVIPII
VFDGFRLQACKEDGTEENQVIEFLWNSIIQYDYSDEEGTFCYQYQRPNKPVRWIKVFTHH
CVFMYECFERIKYEHQWIRLNGTTASSKASNNHVPSTEFENDSGNNSS
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtgatccccgaagtaaaaagaggattttggagcctcatgttgttcacattgat
aagacggaaacggggtttgggttcaatgtgcgaggacaggtctgtgagggtggaactctc
aagtccatcaatggagagctctacgccccactccaacacgtctctgctgtgctggaggga
ggcgccgcggaggaggcgggcgtcttcaagggggatcgcatcctggaagtgaatggcgtt
aatgtggaaggctccactcatcgacaagtcgtggaactcatcaaatcctgtggggattca
ctcactctcacactcatttccgtgagtcaagaagaagcggataagttggagccccattcg
gaggaatctcaaaataatgtgcaattcattgactacacgngaaaaaggtccctacccata
tccatcccggattttaaatttatggaacatgactcagagaaatttgtggtctacaacgtt
tacatggcggggaggcatttgtgttccagacgatatagtgagtttgataccctacatcat
aatttaagacgagagttccttggttttcatttcccaaagttaccagggaaatggcctttt
gtactaagtgatcaacaacttgataccagaagacgtggcttagaacaatacttggaacga
gtgtgtgctgttcgagtgatagcggaatccgatttaatgcaagaatttcttaccgaatct
gatgatcaaattggtagtactccaatggttgatatcaaagtcatgctgcccactaaggaa
attcttacaatcaaagtgatgaggaattccaatacaaatgaggtattcagagtcgtaatt
gaagcaacgggtctaaaacctgaaaattacggttattttgctctttttgaaatcgtcgaa
cataactttgagcgaaaggtgcagcctaatgagtttccccattcattatatattgctaat
tattctaccgctgctgcaacctgcttagtagtccgtaaatggatatttgagccagacact
gaacgaagcttagggaatgatcctgtggcattaaactttttattcatgcaggctattgaa
gacgttaacagaggatatatcaatacgcaagataaactgtatcaactcaaggctcttcag
gaaacaaataagaaaatagagtacctgtcactagttcgaagtatggatggttatggtagt
gttgtattccctcattgtccctgtgattccaaaaaagaaggtcatgttattcccataatt
gtatttgatggttttagacttcaagcatgtaaagaagacggcactgaagagaatcaagtg
attgaatttctttggaatagtattatacagtatgactactctgatgaagaaggaactttt
tgctatcagtatcaacgacctaataagcccgttcgatggatcaaagtttttactcatcac
tgcgtttttatgtatgaatgtttcgaaagaatcaaatatgagcatcaatggatacgcctc
aatggtactacagcctcttctaaagcctctaataatcatgttccatcaacagagtttgaa
aatgactctggaaataattcttcctaa
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