Lepeophtheirus salmonis (salmon louse): 121121433
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Entry
121121433 CDS
T08214
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03018
RNA degradation
lsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121121433
09123 Folding, sorting and degradation
03018 RNA degradation
121121433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121121433
03041 Spliceosome [BR:
lsm03041
]
121121433
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121121433
mRNA degradation factors
5'-3' decay
Lsm complex
121121433
Spliceosome [BR:
lsm03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
121121433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
KOW7_SPT5
LSM14
Motif
Other DBs
NCBI-GeneID:
121121433
NCBI-ProteinID:
XP_040572296
LinkDB
All DBs
Position
7:24022646..24027212
Genome browser
AA seq
95 aa
AA seq
DB search
MSSISVAPNPSTILPLELVDKAIGSRIHIIMKNDKEIVGTLLGFDDFVNMVLEDVTEYES
TPEGRRVSKLDQILLNGNHITMLVPGGEGPESATS
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaatctcagtggcacccaatccttcaacgatcctaccactcgaactagttgat
aaagcaattggatctcgaattcacatcattatgaaaaatgataaagaaatagttggaact
cttctcggatttgatgattttgtaaacatggttctcgaagatgtgactgagtacgaatct
actcccgaaggacgccgtgtatctaaattagaccaaattcttctgaatggaaatcatatt
acaatgcttgtacctggaggtgaaggccctgaatctgccacatcatag
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