Lepeophtheirus salmonis (salmon louse): 121121515
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Entry
121121515 CDS
T08214
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121121515
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsm04990
]
121121515
Domain-containing proteins not elsewhere classified [BR:
lsm04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121121515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
DUF4749
PDZ_2
GRASP55_65
RME-8_N
Motif
Other DBs
NCBI-GeneID:
121121515
NCBI-ProteinID:
XP_040572401
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Position
7:complement(6663105..6680155)
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AA seq
253 aa
AA seq
DB search
MKRMITFTIRRSGREPFGFRIVGGKDAERTCRIEKVTLFSPAHEAGLQTHDYLVTVQGQT
VFELNHNQVVGLIQGAGQVLEIIVERGDHIVPNFDELWGKQGQNTTNEHKTVAEQLQEGP
QRGKEYFLHAMSAGLPGKKDTVFTTVGKPRAQVIQYDNPINCYSEDVINEMMEDNVSWKR
SLNPEPVKKRDHVLPRIQNAPLPVNSHLSVHKEKGFNPRNSNVLAFMSEQERANLNPSKQ
SEIYHTPLPRYFY
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtatgatcactttcacgatccggagatcaggtcgtgaacccttcggctttagg
atcgttggtggaaaagacgcagaaagaacttgccggattgaaaaagttacactcttttca
cctgctcatgaggctggattacagactcatgattatttggttactgttcaaggacagact
gtattcgaattaaaccataatcaagttgttggactcattcaaggagcaggccaagttttg
gagatcatcgttgaaagaggtgaccatattgtgcctaactttgacgagctttggggtaag
caaggtcaaaataccacaaatgagcataaaactgtagctgaacaactacaggaaggaccc
cagcgtggtaaagagtattttcttcacgcgatgtcagctggactaccaggaaaaaaagac
accgtcttcacaacagtgggtaagcccagggcccaagtcattcaatacgacaaccccatt
aattgctactctgaagacgtgattaatgaaatgatggaggataatgtgagttggaagaga
tccttgaatccggaaccagtaaaaaaaagagaccatgttcttccaaggatacagaatgct
cccttacccgttaattcacatctatcagtccataaggaaaagggatttaacccaaggaat
tcaaatgttctcgcctttatgtcagaacaagaacgtgccaatttgaatcccagcaaacaa
tctgaaatttatcacactccccttcccagatatttctattag
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