Lepeophtheirus salmonis (salmon louse): 121121617
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Entry
121121617 CDS
T08214
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2
KO
K05312
nicotinic acetylcholine receptor, invertebrate
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsm04040
]
121121617
Ion channels [BR:
lsm04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121121617
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Ilar_coat
DUF5665
Motif
Other DBs
NCBI-GeneID:
121121617
NCBI-ProteinID:
XP_071746121
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Position
7:complement(3557725..3802191)
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AA seq
642 aa
AA seq
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MSLSFLFLILASFHVKGGEPSSSPTASPSTPFSQITQQNSNFEAYGTTLITTRSEPQNDL
SAKFQQQKDESALRKRSDREIEDSQKSTNPRLSSSKPLLPRVQQESVLLNHLLKNYDRHV
RPLYNASNKMTIKVGITLTQIFDMDEKNQVMTTNVWLDQEWVDEMLIWNPKDYYNITKIR
IPCDRIWLPDIVLYNNADDFSTEYMRSLALVEHNGLVFWPPPTKFRSTCPVDVAFFPFDD
QICMLKLGSWIHDGFSVDVTNRTFEVDLSNYLPNGEWTLLEKPKLVRSERYYPCCIEPFP
EITISLRMRRKTLYYMYNIVFPCMMMSTLTVLVFCLPPDSGEKIALGVTVLLAFSVFMLA
IAEKMPETSESIPLIGIYLTTVMAITSVSVVMTVIVLNFFYRGPTVTPVPVWAQIYILRK
SRATVIRSKYTKESTINSNYLLTSSGKKLKDPSEHEDLNIRHDESAAIIINNEPEEQTFE
GSLNFKLNSSKKKNGALPRSPLAFVNSNNEEDRDYIESSSPEKELNRNHLSSESLSNSDL
TRRHSSLNSRRSSHKASNNNNNNFLPKPSTTTTGGSTRNSLLIGGPLSQSKDVYKMDKMM
DFMSEKQRDDAMIQEILKDWKMLAQQIDFFSLLDIPCDYVFL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagtctatcctttctgtttctcattttagcctcgttccatgtcaaaggaggagaacct
tcgtcctctcccacagcatccccaagcaccccgttctcccaaataacccaacaaaattca
aattttgaagcctatggtacaacattaataacaacgaggagtgagccacagaatgatttg
tcagcaaagtttcaacaacaaaaagatgagtcagcgttaaggaaaagatctgatagagag
attgaagactctcaaaaatccactaatccccggctctcctcatcgaagccccttctccct
cgtgttcaacaagaatctgttctcctaaatcatcttttgaaaaactatgatagacatgta
cgacctctctacaatgcttctaataaaatgacgattaaggttggaatcactctcacacaa
atttttgatatggacgaaaagaatcaagttatgacaactaatgtgtggcttgatcaagaa
tgggttgatgaaatgctcatatggaatccaaaggactactataatattacaaaaatccgg
attccgtgtgatcgaatctggcttccagacatagttctttataacaatgctgatgacttt
tctacagaatatatgagaagtttggctcttgtggaacacaatggacttgtcttttggcct
cctccaaccaagtttcgctcaacatgtccggtagatgttgctttctttccttttgatgat
cagatttgtatgttgaaactgggatcatggattcatgatgggttctcggtggacgtcacg
aatcgtacatttgaagtggacttgagtaactacctacccaatggagaatggactctgttg
gagaagccaaagttggtccgatccgaacgctactatccctgctgtattgagccatttcca
gaaattacgatatctctacgtatgagacgaaaaacgctctattacatgtataacatcgta
tttccgtgtatgatgatgagcacactcactgtccttgttttctgccttccgccggattct
ggagaaaaaattgccctcggagtcacggttttactggctttttccgtttttatgctggcc
atcgctgagaaaatgcccgaaacttctgagtcgatcccattaatagggatatatttgact
acagttatggccatcacctcggtttcggttgttatgactgtcattgtgctcaactttttt
tataggggacccactgttacacctgtaccggtttgggctcaaatatacatactacgaaag
agtagggccacagttattcggtccaaatatacaaaggaatctacgatcaatagtaactat
cttcttacttcctctggtaaaaagctcaaggacccctcagagcatgaggatttgaatatt
cgtcatgatgaatcagcagcaattataattaataatgaacccgaggaacaaacatttgag
ggatctcttaactttaaattgaattcctcaaagaagaaaaatggagcccttcctcgatct
ccattagcatttgtaaactcaaacaatgaagaagatagggactacattgaaagcagctct
ccagagaaggaattgaatcgaaatcacctcagctccgagtctctatcaaattctgactta
actcggcggcattcctctctaaatagtcgacgctcctcccacaaagcctcaaataacaac
aataataatttccttcccaagccgtcaacgacgactacaggaggatctacaagaaatagt
cttcttataggaggacccttatctcagagtaaagacgtatacaaaatggataaaatgatg
gattttatgagtgagaagcagcgagatgatgccatgattcaagaaatcctcaaagactgg
aaaatgttagctcaacaaatagattttttttctcttttggatattccttgtgattacgtg
tttctgtag
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