Lepeophtheirus salmonis (salmon louse): 121121872
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Entry
121121872 CDS
T08214
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121121872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121121872
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
121121872
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
121121872
NCBI-ProteinID:
XP_040572802
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All DBs
Position
7:24728616..24730162
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AA seq
275 aa
AA seq
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MNKKQTDFRRFQSPSDAKDYRIFLKNENKGEKDKYRLDGERLKDSSVRSLFCEVGVLTKC
KGSAYIERGLTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFASRDTSDNSNEKNIS
LFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGS
SVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMEQTVLSS
QIQNLIISAKETLPMIQECLIESLNEKLSEINTSS
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaagcaaacggattttcgccgctttcagagtccttcggatgcaaaagactat
cggatattcctcaaaaatgaaaacaaaggggaaaaagataaatatcgacttgatggcgaa
agacttaaggattcatctgttagatctctattttgtgaggtgggagtcttgacaaaatgt
aaaggctctgcttacatcgaaaggggactgactaaagtaattgcctctgtatttggtcct
cgggaaatccaaaagaaattggacttctcctccacgactggaatcttgtctgttgagtac
aaggaaactgcatttgcatctcgggacacttcagataattcaaacgaaaaaaatatcagt
ttatttttagcagaaacacttcgctccaccgtctgtcttcatttatatcccaagtccaaa
atcgatgtatttattactgtgctcgaaaatgatggatctgctgtggcaacggctatcact
gcagcgtctcttgctctatctgatgcatccattaatttatttgatctggctattggttcc
tcagtcagactgcataaaaaaagggctttcgtcgatccttgtaaaaaagaagaaggaatt
cacgcgagcatcactgacgaagaaaatgacgggaatatagttattggatatcagccttca
ttagaacaaattgtagctctattgcaggatggcatcatggagcaaacggttttatcgtcg
cagatacaaaacttaattatttccgcgaaagaaaccttgcctatgattcaagaatgtctt
atcgaatctttgaacgagaaattatctgaaattaatacatcctcttaa
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