Lepeophtheirus salmonis (salmon louse): 121122233
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Entry
121122233 CDS
T08214
Name
(RefSeq) LOW QUALITY PROTEIN: proteasome activator complex subunit 4
KO
K06699
proteasome activator subunit 4
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121122233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lsm03051
]
121122233
Proteasome [BR:
lsm03051
]
Eukaryotic proteasome
Regulatory particles
PA200
121122233
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_PSME4_mid
HEAT_PSME4
PSME4_C
Cnd1
Motif
Other DBs
NCBI-GeneID:
121122233
NCBI-ProteinID:
XP_071746308
LinkDB
All DBs
Position
7:complement(35313084..35319705)
Genome browser
AA seq
1820 aa
AA seq
DB search
MFSDYEEFESPAEVLVQREKELGFKAQAENIYNSLLPYSQSLDCESSKWLANLKSHLGEI
VGSRDVYYGFAKWMQSLNKYIKLYGLKFSKSDHITFIKVFYEFVTTCRVDYAILANAVNL
LSSLLYRRYLIESSELTLNWRPLYDLFNYHFCSSSAKHDMFQVPPPLRNGIRVLIRYAQP
YFPPGATVEILQTLKPLMCPLDVTSEKAIDMFQMFLPTFNVRDRKESTYQLWFDDFLAYL
KIFNSPHVQGYIFMLYSRLAEDNIGSIDWNPILPLLFFQNSKDFCPTCGYKNVHVGIQSY
PYSANQMQISSRWIVATMGGKESQTQAYLNKMFKSLESYFHPTNVGPYSTKLMEFLARLC
LNFVRRLRQERSSQKYWGNTIPEGSKLTEDDVTKFVESLKPIILLSLYSRAGIHEKGQVL
PILATLRPQLIIPDLVERMNTSLEALTEPHKLTASIAAIASVARPLVSSGAKYSEGPTCV
IPLLISSLPGLDPNDFHKSITTLQLISNFCMLIPIVDCSDRPSSNDLSTEESILRNQTAS
FEEFVIQFLDRCFAFIDNSSFEYTREFVNTSVDHQSFQEEGLIYTWVGTAFQSIMFQASS
DIFEIALKKLEKYIKGKILEHKVAGKLAAGLCYAVTRANPKKGLPVFLTDAIKNIKSIIS
SHDGILQQENTNTEIMFNLRIIFEVIYLNGYELLSYVNELEEILDLTLHMKNVDAHSFAC
MVLKRLLSSLSLVYPLEYRLIPHEYDDTNKLYLNEWGISGDIHDLKLHVHDPTDEEMECV
QRLVNKFIGKELCALEEFASGARPMPRTEVKNRLNIIKEAIVGAAYVLPTWTHEEHIKLV
PSLTIPAVIQDNIIVHSRKLEVNLNGENVRWKVIQVLDKLQSRLIMDEDDTKSLNLIIRI
YYYVQDDFGIRKDQYNAQYSAISSETTRLENKLLGKKANIRSILIEQVMLQHFCRISESM
HLRFTETHLKVMNNLLKLSTSKYHNVRIIAQDVLIKTMNQVLYSYTKLIPSLVQILKDSK
VTDEQLKGALFLIKGSTNRSLISKHNWEVQEKLWQAIIDSPVSSKNSIISLMENGLVPVV
RNCVSFMITSEIPDSFIQFTNSQFKENGTFHSGLECISDSDVKSYIESLNKKNDQNAIHY
NNLVNSLTDTIELGNIHWRRYNFAYTMIIRLIRCDIELPVRTISIFVKNLLSENLQIRSA
SNYAVTRVLRQLKRKHPKINVSVPDLPLDTIAGDRTDNEWLCYDPSNLPDSEEQWDRPKY
VHKTHYGYNIWPKDMTVYAPYAQQPKLDRSRDELTEREKIFFDFFMDQGNIDKFIHFNTI
EYNKDHDKFNCEKFAFFKGIFRNFGDSFLHLFRPHLERLVNDNRDSYQRCACEIIAGIIR
GAKHWNYTKTKNMYSWLIPLIRIGLEKVSPDSTFDWGTCFATSSESRDPNKIYWVLKVLM
EEPIRSQGSFIDSSRLYVLQGFLSQQEWRVGHLLHELNNFLKPFLTHPFKNVRDRLGSVL
MSIYLIDVSDTVISYHRGPLLKDFFREVLPQLQIVIEESETNNTSNVTLASDSIESSELQ
KGMRLLQTVSKFVTCIITRGLSEIRIDYFNLLPMLCVHQANSFELSLAQDCTDSLAALSQ
SILPSNIVPEWIQAMEKTSTLSSWKARLALLEFLQVSVFCNFPLLTSREEWTIKICNMIV
LCLKDKSIEVREKGSFVLSGLIHSDFITENKSKELLKSFFKRAKSRTNEDDSIIKRHSGV
LGLCAFVSAYPYDVPECVPDILVVLSDHLHDSQPIPDVIRRTMQDFKRTHQSNWEECKLK
FTEDQFSVFSDISVSPSYYA
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atgttttccgactatgaggaattcgagagtcctgccgaagtattagttcaaagagagaag
gaattggggttcaaggctcaggcagagaatatttacaattctttacttccttattcgcag
tccttggattgcgaatcctccaaatggcttgctaatctgaaatcccacttgggggaaatt
gtgggatctcgagatgtgtactacggttttgcgaaatggatgcagtccttgaataagtat
atcaaactctatggtctcaaattctctaaatcggatcatattacttttatcaaagtgttc
tatgagtttgtcactacatgtcgcgtggattatgccattctggctaatgccgtcaacctc
ctctcctctcttctttatagaaggtatctcattgagtcctccgagctcacactcaactgg
agacccctctatgatctcttcaattaccatttttgttcgtcatcagcaaaacatgatatg
tttcaagtccctcctcctttaagaaacggtattagggttcttatacgatatgctcaaccc
tattttcctcctggtgctactgtggaaattctacaaacattgaaaccacttatgtgtcca
ttagatgttacatcggaaaaagcaattgatatgtttcaaatgtttttacctacttttaat
gttcgtgataggaaagaaagtacatatcaactctggtttgatgactttttggcgtattta
aagatttttaattctccacacgttcaagggtacatctttatgctctattctcgacttgct
gaagataatatcggaagtattgattggaatcccatccttcctcttctttttttccaaaat
tcaaaggatttttgccctacctgtggctataagaatgttcacgttggaattcagtcatat
ccttattctgccaatcaaatgcaaatatcttctagatggattgttgcaacaatgggaggg
aaggagagccagactcaagcatatttgaacaaaatgttcaagtctcttgagtcatatttt
catccaacaaatgttggcccatatagtacaaagctaatggaattcttagctagactttgc
ctaaattttgtccgtcgccttcgtcaagaacgaagtagccaaaagtattggggtaacacc
ataccagaaggaagcaaattgaccgaggatgatgtcacgaaattcgtagagtctttgaaa
cctattattttattatctttgtattcaagggctggaattcatgaaaaagggcaagtcttg
cctattttagccacattacgccctcaacttataattcccgatcttgttgaacgcatgaat
acttctttagaggccttgacagagccacataaacttacagcctctattgctgcaattgct
agtgtagctagaccattagtctcttctggagctaagtattcagaaggaccgacgtgtgtc
atacccttgcttatttcttctcttcccggactagatcccaatgactttcataagtctatt
actacgctacagcttatttccaatttttgtatgttgatcccaattgttgattgttctgat
agaccttcatccaatgatctatctaccgaagaaagtattttacggaatcaaacagcttct
ttcgaagaattcgttattcaatttttggatagatgttttgcatttattgataattcatcc
ttcgaatatacaagagaatttgttaatacatcggtagaccatcaaagctttcaagaagag
ggtttgatttatacatgggtaggaactgcatttcaatctattatgttccaagcatcctca
gacatctttgaaattgcattgaagaaactagaaaagtatattaaagggaaaattttggaa
cataaagttgctggtaaacttgctgcgggactttgttatgctgtaactagagctaatccg
aagaaaggtcttccagtttttttgactgatgcaattaaaaatatcaaaagcataatttca
tctcacgatggcattctgcagcaggaaaataccaacacagagatcatgtttaatctacgt
ataattttcgaagtaatctatttaaatggttatgaactactttcctatgtcaatgagttg
gaagaaatattagatttaacacttcatatgaaaaatgttgatgcccattcttttgcttgc
atggtgttgaaaagactcttaagttctttatccttagtgtatcccttggaatatagacta
attcctcatgaatacgatgacactaataagttgtatttaaatgaatggggaatatctggg
gatattcatgatttaaaattgcatgtacatgatccaaccgatgaggaaatggagtgcgtt
cagagacttgtaaataagtttatcggtaaggaattatgtgctttagaagaatttgcttca
ggagcacgtcctatgccgaggactgaagttaaaaacagattaaatataatcaaggaagcg
attgttggagctgcgtatgtacttcctacctggactcatgaagaacatatcaaattagtt
cctagtttaactattccagcagttattcaagacaatataattgttcattccaggaaattg
gaagttaatttaaatggtgaaaatgtgcgctggaaagtaattcaagttttagataaatta
cagtctcgtctaattatggatgaagacgatacaaagtctttaaatctaatcatcagaatc
tattattacgtccaagatgattttgggattcgaaaagatcaatataatgcgcaatattct
gcgatatcctcagaaacaactcgtttagaaaacaaacttctcgggaaaaaagctaatata
agaagtattcttatcgaacaagttatgcttcaacacttttgtcggatttcagaaagtatg
caccttcgttttacagagactcatttgaaggttatgaataatctgcttaagttatctaca
tccaaatatcacaatgttcgaattattgctcaagatgttctcataaagactatgaatcaa
gttctttacagctacacaaaacttattccttccctcgttcaaattttaaaagatagcaaa
gttacagatgaacaactgaaaggagccctttttctcattaaaggttcaactaatcgtagt
cttatctcaaagcataactgggaagtgcaggagaaattgtggcaagctataattgactct
cccgtaagctcaaaaaattccattatatcattaatggaaaatggattggtaccagttgtt
cgaaattgtgtatcatttatgattacgtcagagatacctgatagctttattcaatttaca
aattcacaatttaaagaaaatggaacttttcatagtggactggaatgcatttctgacagt
gatgtaaaaagctatatagaaagtcttaacaaaaagaatgatcaaaatgctattcattat
aataatttagttaatagtttaacggatactattgagttaggaaatatacattggcgtagg
tataattttgcatacactatgattattcgcttgattagatgtgatatcgaacttccagta
agaaccatatccattttcgtaaaaaacttacttagcgaaaatttgcaaattcggtctgct
tctaattatgctgttactcgagtattgagacagttaaaaagaaaacatccgaagattaat
gtttctgtaccagatttaccccttgataccatagctggagatagaactgataatgaatgg
ctttgctatgatccgtcaaatctgccagattctgaagagcaatgggataggcctaaatat
gttcacaagacgcattatggatataatatttggcccaaagatatgacagtctatgcaccg
tacgctcaacaacctaaattagatcgttctcgtgacgagttaaccgaaagagagaaaata
ttttttgatttttttatggatcaaggcaatatagacaagtttattcattttaatacaatt
gaatacaacaaggatcatgataagtttaattgcgaaaaatttgcattttttaaaggtata
tttagaaattttggagactcttttctgcatttatttagacctcatttggaacgacttgtt
aatgacaatagagatagttatcaacgatgtgcttgtgaaattattgctggaattatacga
ggtgcaaagcattggaactatactaagactaaaaatatgtactcttggttaatacctctt
attcgaattggtttggaaaaagttagccctgattcaacttttgattggggaacatgtttt
gccacaagttctgagtccagggatccaaataaaatatactgggttttgaaagtgttaatg
gaggaacccattcgttctcagggatcatttattgattcatcacgtctctacgttcttcag
ggatttttgagtcaacaagagtggagagtaggtcatctactccatgaattgaacaatttt
ctaaaaccttttttaactcatcccttcaaaaatgtaagagatagactgggctctgtttta
atgagtatatatttgatagatgtgagtgacactgtaataagctatcatcgtggaccactt
ctaaaagatttttttagagaggttctccctcagcttcaaattgtcatagaagagtctgaa
acaaataatacatcaaatgttactttagctagtgactcaatagaatcatctgaacttcag
aagggaatgaggctgttacaaacagtttccaaatttgtaacttgcataattacgcgtgga
ttaagtgaaatccgcattgattactttaatttactacctatgttgtgtgtacatcaggct
aatagttttgaacttagtctcgcgcaagactgtacagattcacttgctgctctatctcaa
tctattctgccgtctaatattgtacctgagtggattcaagccatggagaaaacatcaact
ctctcctcgtggaaggctcgtcttgcattattagaattcttacaagtgtctgtattctgt
aattttcctttattaacttcaagagaagaatggacaatcaaaatatgcaatatgatagta
ctttgcttgaaagataaaagtatcgaagttagagaaaagggatctttcgttttaagcgga
cttatacattcagattttatcaccgaaaacaaaagtaaagaactattgaagagttttttc
aagagagctaaatcgaggaccaacgaagatgatagtatcataaagagacatagtggtgtc
ttagggctgtgtgcttttgtaagcgcatatccatacgatgtgcctgagtgtgtacctgac
attcttgtagttttgagtgatcatttacatgattcccagcctattccggatgtgataaga
aggacaatgcaagattttaaacgaactcatcagagtaattgggaagagtgcaagctcaaa
tttacagaagatcaattttcagtatttagtgatatatctgtttctcccagttactatgct
tga
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integrated database retrieval system
