Lepeophtheirus salmonis (salmon louse): 121122380
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Entry
121122380 CDS
T08214
Symbol
Nup43
Name
(RefSeq) nucleoporin Nup43
KO
K14305
nuclear pore complex protein Nup43
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121122380 (Nup43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121122380 (Nup43)
03036 Chromosome and associated proteins [BR:
lsm03036
]
121122380 (Nup43)
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121122380 (Nup43)
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121122380 (Nup43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WDR55
WD40
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_WDR75_1st
EIF3I
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_HPS5
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_2nd
MIOS_WD40
DUF5074
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
121122380
NCBI-ProteinID:
XP_040573287
LinkDB
All DBs
Position
8:29877862..29880121
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AA seq
370 aa
AA seq
DB search
MRIPESSTTLMEGGTGVSGKGVFVCKKINCIRWKPRKDTSSLDGNLFVTGSWDDGPSNEV
ALWKVNEGEGESASLLASLPHSGDINALEFLNSETFVTGSSDGCVHLFRIHNQDLSLLNS
WNGLHNGCYRASGSNSVSCSGEIFASAGEEGKVVVINARTKQSIKTYEQADSCSLSAVHF
VKHDEILTANMRGQMKLWDLRSSETSSPSTTFFSSNTDQVGITCVSRHPTQSHVICTGAQ
DGKIAFWDFRKERYPVTILNAHKSAVSEVQFHLQSPDHIFSCSQNGDIWHWDASAVTRAN
LISFGNMNDDEAQKGFSSPWLSSEAIKHRVEATSLMSKQYLPINTLDTLGSSILFAGDNE
AIYIFSSVIL
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaggattccagagtcatcaaccactttgatggaaggcggtacaggcgtatctggaaag
ggcgtatttgtttgtaagaaaataaactgtattcgttggaaacctcgaaaggatacctca
agtttggatggaaaccttttcgtaacgggttcgtgggacgatgggccttccaatgaagtt
gctctctggaaagtgaatgagggagaaggagaatccgcctctctactcgcttctttacct
cattcaggggacatcaatgcactcgagtttttgaattcggaaacattcgtgacgggttcc
tctgatggatgtgttcaccttttccgcatccacaatcaagatctgagtctcctcaactca
tggaatggccttcataatggatgttatagagctagcggatcaaatagtgtatcgtgctct
ggagagatcttcgcttcagctggcgaagaaggcaaagtagtagttattaatgcaaggaca
aaacaatccataaaaacatatgaacaagcagatagttgtagtttaagtgcagttcatttt
gtaaagcacgatgaaattctcactgctaatatgcgtggacagatgaaattatgggatctt
agatcttcggaaacgtcttctccttcgacaacgtttttttcttctaacacagatcaagtc
ggaataacttgcgtaagtcgtcatccaacacaatctcacgttatttgtacaggggctcag
gatggtaagatcgctttttgggattttaggaaagaacgatatccagttacaatcttaaat
gcacataaaagtgctgttagtgaagtccagttccatcttcaatctcctgaccatatattc
agttgttcccaaaatggagatatttggcattgggatgcttcagcagtaacaagagcaaat
cttattagcttcggcaacatgaatgatgatgaggcacaaaagggtttttcatccccctgg
ttgagtagtgaggccattaagcatcgtgtggaagccacttctttaatgtctaaacaatat
ctacctattaatacattagatacattgggatcatctattttatttgctggtgataatgaa
gcgatttatattttttcaagtgtaattttataa
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integrated database retrieval system
