Lepeophtheirus salmonis (salmon louse): 121122410
Help
Entry
121122410 CDS
T08214
Symbol
Csl4
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121122410 (Csl4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121122410 (Csl4)
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
121122410 (Csl4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
121122410 (Csl4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
ECR1_N_2
TRAM
Motif
Other DBs
NCBI-GeneID:
121122410
NCBI-ProteinID:
XP_040573328
UniProt:
A0A0K2UQF8
LinkDB
All DBs
Position
1:25398337..25399261
Genome browser
AA seq
208 aa
AA seq
DB search
MPQPQDSLVVPGMRLCVADENNVSGPGTYSQNGYIYSSLAGSLKLVRSKKDDSKSASEVR
ITVVPPSSVVTEIPSLGDIVTVKVIAVNPRSAKVQIVCVRNSALSEPFRGLIRKEDVRAT
EKDKIEMYKSFRAGDIVLCRVISIGEASSGYLLSTAENELGVVIASSSFDKTAKLVPISW
TKMQCPKTFNKEFRKIAKVVPEDLDDHT
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagccgcaggatagcctcgttgttccagggatgcgactctgtgttgcagatgaa
aataatgtatccggtccgggtacttactcacaaaatggctacatttactcatctttagcc
ggctctctcaaattggttcgtagcaagaaagatgattccaaatccgcttcggaagtacgg
ataaccgtcgttccaccttcctctgttgttacagaaataccatcactcggtgatattgtg
acagttaaggtcatagcagtcaatccaaggtctgccaaagttcaaatcgtttgtgtacgt
aattctgccttgagtgagcctttccgaggtcttattcgtaaagaagatgtacgtgctaca
gaaaaggataaaattgaaatgtacaaatcgttccgagctggggatattgtattgtgtcgt
gtcatatctatcggagaggcttcctctggctatttacttagcacggcagagaatgaactt
ggtgttgtcattgcaagctcctcctttgataaaactgctaaactagttcctatatcctgg
actaaaatgcagtgtccaaagacttttaataaagagtttcgtaaaattgcaaaggtcgtt
cctgaggacttggatgatcatacatga
DBGET
integrated database retrieval system
