Lepeophtheirus salmonis (salmon louse): 121122459
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Entry
121122459 CDS
T08214
Symbol
Usp39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121122459 (Usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsm03041
]
121122459 (Usp39)
Spliceosome [BR:
lsm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
121122459 (Usp39)
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Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
121122459
NCBI-ProteinID:
XP_040573387
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All DBs
Position
1:25344378..25346441
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AA seq
513 aa
AA seq
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MMENGVKRELIHGDEDNSSPQDALSTRIKEEDEVDTKRIKIENGVKPSRECPYLDTIDRH
VLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGRNTHAYVHSVSDGRHRVYLNLETKKFY
CLPDNYEIIDSSLADIIYVLNPIFSPELIKRLETSSKEVRAYCGSMYIPGIVGLNNMKAN
DFCNVVIQALSHVTPIRNYFLEENNYKSIRRPPGDISFILVQRFGELIRKLWNPKNFKAH
VSPHEMLQAVSLASKKTFQFTEQGDSISFISWLLNALHMALGGTKKPNSSIIYKTFLGGM
RIHTRKIKADESGKPEDMSTYSDDDEDDSEYQWKTVESPFLYLTTELPPMPLFRDENYEN
IIPQVSLYNILTKFNGEREMEYKTYKDNFLKKFEITRLPPFVILYIKRFTKNTFYVEKNH
TIVNFPIKSIEFGDILAPELKEKMSEGDGTYDLLANIVHDGDPKDGTYKVHILHKGSGKW
FEMQDLHVDKILPEILPLSEAYIQIYERRSSSK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaacggagtcaaacgagagttgatacatggtgatgaggacaacagctcacct
caagacgcactatcaactagaataaaggaggaggatgaagttgacacgaagcggattaaa
atagagaatggagtgaagccttctcgagaatgtccttatttggatacaattgatcgccac
gtactggattttgactttgagaagctttgctccgttagcctgagtcgtattaatgtttat
gcttgtcttgtgtgcggaaaatattttcaaggaagaggtcggaatactcacgcctacgtc
catagcgtctctgatggaagacatcgagtctatttaaatctcgaaacaaagaagttttat
tgtctaccagacaattatgaaatcattgattccagtcttgcagatatcatttacgtcctt
aatcccatttttagcccagagttaattaagagacttgaaacttcttccaaagaagttaga
gcatattgtggatccatgtatatcccaggaattgtgggtctgaacaatatgaaagcgaat
gatttctgtaatgttgttattcaagctttgagtcatgtaactcccattcgaaactatttc
ctcgaagaaaataattacaaaagcattcgtaggcctccaggtgacataagtttcattcta
gttcaaaggtttggagagctcattcgcaaattatggaatcccaagaacttcaaagcccat
gtatctcctcatgaaatgctccaggctgtaagcttagcctccaaaaagacttttcagttt
acggaacaaggagactcaatatcgtttatttcttggctcttaaatgcactccatatggct
ttgggtggaactaaaaaacccaattcttcaataatctataaaacattccttggaggaatg
agaattcatactcgcaaaattaaagcggatgaatctgggaagcctgaggatatgagtact
tactcagatgatgatgaagacgactctgagtatcaatggaagactgtcgagtctccattt
ctatatctgacaacagagctacctccgatgcctttatttcgagatgaaaactatgaaaat
attattccacaagtatcactctataatatcctcaccaaattcaatggggagcgggaaatg
gagtacaaaacctacaaagataactttttaaaaaagtttgaaatcactcgacttcctcct
tttgtgatactctatataaagagatttacaaaaaacacattttatgtggaaaaaaatcac
accattgttaatttccctattaaatcaatagagtttggtgacatactggccccggaactc
aaggaaaaaatgtctgagggagatggaacctatgatctcttagcaaatatcgttcatgac
ggagatcccaaggatggaacgtataaagtccatattctacataaaggctcgggaaaatgg
tttgaaatgcaggatctacacgtcgataagattcttccagagattttgcctttatccgaa
gcatatattcaaatatatgaacgaagaagttcttctaaatag
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