Lepeophtheirus salmonis (salmon louse): 121122525
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Entry
121122525 CDS
T08214
Name
(RefSeq) general transcription factor 3C polypeptide 3
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsm03021
]
121122525
Transcription machinery [BR:
lsm03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
121122525
TFIIIC, fungi type
121122525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_2
TPR_8
TPR_19
TPR_16
TPR_1
TPR_11
TPR_17
TPR_CcmH_CycH
TPR_12
TPR_9
ANAPC3
TPR_15
TPR_EMC2
TPR_MalT
BTAD
Ned1_M
TPR_21
ARM_TT21_C
CCSAP
Motif
Other DBs
NCBI-GeneID:
121122525
NCBI-ProteinID:
XP_040573480
LinkDB
All DBs
Position
8:complement(4847890..4852963)
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AA seq
927 aa
AA seq
DB search
MDDVPKVSISETQLLDPVAILKQLQLDDETEGQENETSTEKPSTSIEAVASGNALKFFMN
QDSDEDYFDEKEDEAYMDVVDGEETLYEFKDDPNAVRERELTDKYLAGNLSFSDFVREMN
QESDEEELSSELEENNEDEDEKDEEWIPETKKSKVSEIDDPNSEAETDHCTQFEKEMDQT
SRQQLGKKKKRVGVRTRRRKLDPALQGLIGEANLRFARGDKETAIRMCMEVIRQDPTVPE
PFQTLAALYDENGEAEKSLQFSLIAAHLAPQDPEEWARLADLSLELGDQSQAAACYRKAI
DAEPENPRYHLARCELLEQLGEMKIALRGYKRFIQVLRDDQGKDFLHGSKEIARILHQKG
DVEEAKNIIETAFKKHPDCVSPDDVNLFLELLISLKLYEDTLDILCSKSIVKFSSDLPQN
ELEDLSPEKQLQSFNKVVIPEDTPLDIRAKLIIVLINLKACHLVKDDLSNELLNSNVEEF
GDLMLDVAEAYMNQEKYDIAEVYLKQLVQSNEFNKAAVWLFYGEALFKLGHLEEAEKAYQ
LVVDLAPQHCDARKTLSIILHRLNRPDEALSILTQDKAELLDSSLLYERCQLLFSEGQTE
EFIDKAKMLFNRHFINIRNRDELHAIASAKKLVSKNRALSEVRAFYREPIKFDEGPSFQE
DNQIELSDEFELFRKLCVLLHNLKRYDELQRLTFSALGSPHFNKKLEHSKELTFYCLISS
FRNGDSYHAYNIVRELVVKNIDNHRVWNLFNLVIMRADDVRHNRFLMRLMSRHPDNLALG
ILNGHNCLVAGTYKYSLGEYMSAFRQAKTNPMIAMMLGLAYTHMACQKFSAKKHSLVVQA
IAFLNVYMELRGPCQESYYNLGRAMHQLGLLPNAVFYYKKTLALKSAIPENNNFDLKREA
AYNLSLIYQNSGNEDLVRHYIHKYIVI
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgttcctaaagtttccatttctgagacgcaacttctggatccagtagccata
ttaaaacagcttcagcttgacgatgagactgaaggtcaggaaaatgagacatctacggaa
aagccttctacttctatagaagcagttgcgagtggcaatgctttaaagttttttatgaat
caagattctgatgaagattatttcgatgaaaaggaggatgaggcgtatatggatgttgtg
gatggagaagaaactttgtatgagttcaaagatgatccgaatgccgtgagggagcgtgag
ttaacagataaataccttgctggaaacttgtcatttagtgactttgttcgagaaatgaat
caagaaagtgatgaagaagagctaagtagtgagttagaggaaaataatgaagatgaagac
gaaaaagatgaggaatggattccggagacaaaaaaatcaaaagtctctgaaattgatgat
ccaaattcagaagctgaaacggatcattgcacccagtttgaaaaagaaatggatcaaaca
agtcgacagcagttagggaagaaaaagaaacgagttggtgttcgaactcgtcgtcgaaaa
ctagaccctgcccttcaaggtcttatcggtgaagccaatcttagatttgctaggggagat
aaagaaactgcgataagaatgtgtatggaggtaataagacaggaccctactgttcctgag
ccttttcaaaccttggctgctttgtacgatgagaatggagaggctgaaaagtctcttcaa
ttctctctcattgccgcacatttagctcctcaagatcctgaggaatgggcaagacttgcg
gatttgtctttggagctaggtgatcaaagtcaagctgcagcttgttataggaaagcgatc
gatgcggaaccagaaaatcctaggtatcatttggcaagatgtgaactcctagagcagctc
ggcgaaatgaaaattgctttgagaggatataagaggtttatacaggtcttaagggatgat
caaggtaaggattttcttcatggatccaaggaaattgctcgaattctgcatcaaaaagga
gacgtagaagaggcaaaaaatatcatcgaaacagctttcaaaaaacatccggattgtgtc
agtccagatgatgttaacttgtttttggaactcctcatatcattaaaattgtatgaagat
actttggatattctttgtagcaagtctattgttaaattttcctcagatttaccccagaat
gaattggaagacctttctccagaaaaacaactacaatcctttaataaagtagtcattcct
gaagacacccctcttgatatccgtgctaaacttataattgttttgattaatttgaaagct
tgtcatttggtgaaggatgacttgtcaaatgagctattaaattcaaatgtggaagaattc
ggggatttgatgctagatgtagcagaggcgtacatgaatcaggaaaaatatgacattgcg
gaagtttacttgaaacaactagtgcagtccaatgaatttaataaagctgcagtttggctt
ttttatggcgaggctctattcaaattgggacatctcgaagaagcagaaaaggcttatcaa
ttagttgtagatcttgcacctcaacactgcgatgctcgtaaaactctgtccatcattctt
catcgtttaaatcgccctgatgaagccttaagcatattgactcaagataaagcggaacta
ctggattcgagtcttctttatgagagatgtcaattgttattttccgaagggcaaactgag
gaatttattgataaagccaaaatgctctttaatcgtcatttcatcaacatcagaaatagg
gatgaacttcatgccattgcgtctgctaaaaaactagttagcaagaatagagccttgtcc
gaagtgcgtgccttttatcgtgagccaataaaatttgatgagggaccctcctttcaggaa
gacaatcaaatcgagttgtcggatgaatttgaattgtttcgtaaattatgcgttcttttg
cataaccttaaaaggtatgacgaactacaacgtctaacattttccgcccttggatcacca
catttcaataagaagcttgaacactctaaagaacttactttttactgcttaatatcttct
tttcgcaatggggattcatatcatgcgtataatattgttcgcgaactagttgtaaagaat
attgataaccatcgtgtatggaatctattcaatttagttattatgagggcagatgatgtg
agacacaaccgatttcttatgcgtctcatgagtcgtcatccggataatcttgcccttggt
atattgaatggacataactgtctcgttgctgggacttataaatactcattgggggaatac
atgtcagcattcagacaagccaaaacgaatcccatgattgcaatgatgttgggtctagca
tacacgcatatggcttgccagaaattttctgctaaaaaacacagtttggtcgttcaagcc
attgcatttcttaatgtttacatggaattgagagggccatgtcaagaatcctactataat
ctaggaagagcaatgcaccaattaggacttcttccgaatgcagtattctactataaaaag
acattggctctaaagtctgcaataccggaaaataataattttgatttgaaaagagaggct
gcctataatctatccctaatctatcaaaactctggcaatgaggatttagtgcggcattat
attcataaatacatagtgatttga
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