Lepeophtheirus salmonis (salmon louse): 121122530
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Entry
121122530 CDS
T08214
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 20-like
KO
K24741
WD repeat-containing protein 20
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsm04990
]
121122530
Domain-containing proteins not elsewhere classified [BR:
lsm04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
121122530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
PD40
Beta-prop_TEP1_C
eIF2A
Motif
Other DBs
NCBI-GeneID:
121122530
NCBI-ProteinID:
XP_040573484
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MNGAHSLEDESEIIKSSFITSEGIYRLVMTPEFSGSGRSSLNAVSGGSLSSSHASRYGSA
ATSNNTSSSSSVPSSAPPVRVSFLGNMMTFNFGRELFVYPYNNGSILEKPLDKRVYKGTC
PTCHDFASEEEEEEEESLSLLVGFSXGQIQLLDPLIKELSQLYNEDRFVDKTKVTRVKWL
PGTRDLFLSSHASGHIYVYNRDLPCNLSAPTYSLLKKGDGFSVYTQTKTGKGSPSKNPIC
KWSIGKGSVNEFAFSPCARYLAVVGQDGYLRIFNYDAMECVGLARSYFGGLLCVSWSPDG
KYIVCXGEDDLVTVYSFLEKRVVVRGQGHKSWVSVVAFDPYMSFGEVPDGFDLSASEEDR
DEEDSDRRRRRKKLSSSSPNSSGSNNNNVTCYRFGSVGQDTYICLWDITEDILKGSPTGI
TVSSGVLSGVSSASCHSGKSNASSPNSSLGALTNASHTSTSFSVSSKDSGVITDAASSSS
NHTSLTHRLASLNFGGGDKKDKKSGGISSKSSSRSSSASVSMNTCGSSCHDRYPEETIKL
GSQQCPRIYEIPVIEPLVSKKVAHERLTALVFREEYLVTACQDGFVRTWARPGKMNVGNA
NSLCPESPPRSSTSLSSSTCCNNNNPGSVSTTVDGTIV
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtgcgcatagtctggaagatgagtccgagatcatcaagagctcctttataacg
agtgaaggaatttatcgcttagtcatgacccccgagtttagtggctctggacgttcctcc
ctgaatgccgtgagcggtgggagtttgtcctcaagccacgcctcccgctatggcagcgct
gccacctccaacaacacctcctcctcctcttcagtcccgtcctctgctcctcctgttcga
gtctccttcttggggaacatgatgacgttcaactttggacgagagcttttcgtgtatccc
tacaacaatggctccattctggagaaacctctggacaaacgcgtctacaaaggcacttgt
cccacatgtcacgactttgcctccgaagaagaagaagaagaggaggagtccctctccctt
cttgtaggtttctccnggggacaaatacagcttcttgaccctctaatcaaagaactttca
caactctacaacgaagatcgattcgtggataaaactaaagtaaccagggtcaagtggtta
cctggaacaagagatctctttttatcgagccatgcctcgggccatatctatgtttataat
cgtgatctcccctgtaatctctctgccccaacttattctcttctcaaaaaaggcgacggc
ttctctgtctatactcagacgaaaacagggaaaggctcaccttcgaaaaatcctatttgt
aaatggagcattggtaaaggaagtgtgaatgaatttgcgtttagtccatgtgctcgttat
ttagccgttgtcggtcaagatgggtatttgcgtatttttaattatgatgccatggaatgt
gttggtcttgcaagatcctactttggaggattactctgtgtatcctggtctcctgatgga
aaatatattgtgtgcnggggagaggacgatcttgtcacagtgtattcctttttggagaaa
agggttgtcgttagaggtcaagggcacaagtcatgggtgtctgttgttgcctttgatccc
tatatgtcttttggtgaagttcccgatggttttgatttgtcagcttcggaagaagatcgc
gatgaagaggatagtgatcgaaggaggagacgaaagaaattatcttcctcaagtcctaat
agtagtgggagtaataataataatgtaacttgctatcgtttcggatccgttggacaggat
acctatatttgtttatgggatatcacagaagatattctaaagggatcaccgacagggatt
acagtgtcatctggtgtactatctggagtttcttctgcaagttgccatagtggaaaaagc
aacgcaagttctcccaactctagtcttggagccttaacaaatgcctcccacacttcaacc
tccttttcagttagttctaaagactcgggtgtgattacagacgcagcttcaagttcttct
aaccacacatctttgacacatagacttgcttcacttaattttggcggaggggataaaaag
gataaaaagagtggtggtatctcttcgaaaagttctagtcgttcttcatctgcaagcgta
tctatgaacacttgtggaagctcttgtcatgatcgatatccagaagagactatcaagtta
ggttcccagcaatgtcctcgcatctatgaaatacctgtgattgagcccctagtaagtaag
aaagtggctcatgaaagactaacagctttagtttttagagaagaatatttggtcacagct
tgtcaggatggctttgttcgaacttgggcgcgtcctggaaaaatgaacgtaggcaatgct
aattccctttgtcctgagagccctccaagatcctcaacttcattgtcgtcatcaacatgc
tgcaacaacaataatcctggaagtgtttcaacgacagtcgacgggactattgtttaa
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