Lepeophtheirus salmonis (salmon louse): 121122705
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Entry
121122705 CDS
T08214
Symbol
Nup58
Name
(RefSeq) nucleoporin p58/p45
KO
K14307
nucleoporin p58/p45
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121122705 (Nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121122705 (Nup58)
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121122705 (Nup58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
Nup49_C
SASP
FF_PRPF40A
Motif
Other DBs
NCBI-GeneID:
121122705
NCBI-ProteinID:
XP_040573664
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All DBs
Position
8:1757739..1759913
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AA seq
543 aa
AA seq
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MAFSFGSTTGAAAKPTGFAFGSTATSAAPSQGFGAGFGSTAPSAGAAPAFGGSFGATGGA
TAAPAFGAASSGTPVFGANTSAAPAFGFASTATSAAPSFGAGFGAASTAFKTTSAAPSFG
TTTNAGFGGTTGFGFGGGTLGGATTTTSSLAFGGQPPNKPFCATTTASIGLAGAPAAGTK
PFSFGAGNPSITAATGLGGAKLPQNAFGAPQQQPVVNLGLGGTTNSSSGGSNESNKNDIK
ALKETHIPNEILSTVDEFKKLVKEERNISSDIAHISSRIHDKIKSETEALVRLVSILSSG
IKKNKAALDKLKLEAAQELRNAEIAQRTKDTPGALQYENVAPYEYFSRLVSNFENDMLKY
RQQIDETEQHLHASASSAALSPEDLSKAIRKIHEAFTSLAGRYQHIHDCIQEQKTLYVKL
HRQIYGVSTDLFDSSKPKLVKRIMTMEGPSPFILGHRDPFSAVRANLTAQPQQSSINNAN
SAPSGPPTMGLGSTSSFGIGNSLTPQIGQTNNTTFSVFPPSSQTTQQQGVLGSTMSPFST
RFC
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggccttttcctttggttccacgacgggtgcagccgccaagcccacaggctttgccttt
ggatccactgcaacaagtgctgctccttctcaggggtttggagctggatttggatctact
gcaccgagtgctggagcagctccggcttttggagggagtttcggtgctacaggaggagca
actgcagctcctgcatttggggcggcatcaagcgggactcctgtatttggggccaacacg
agtgctgctcccgcttttggatttgcatcgacagccacaagtgccgctcctagctttgga
gctggatttggggcagcatcaaccgcctttaaaacaacctccgccgctcccagctttgga
actacaacgaatgcgggattcggtgggacgacgggatttgggtttggtggtgggactcta
gggggcgccacaaccacgacctcttccttagcgtttggtggacaaccccccaataagccg
ttttgtgccacgaccactgcatcgatcggccttgctggtgctcctgctgctggcactaaa
cccttttcatttggggccgggaatccgagtatcactgcagctacaggattaggaggagct
aaattaccacagaacgcatttggtgctcctcaacaacagcctgtagtcaatctaggactt
gggggtacaaccaattcatcgagtggtggatctaatgagtctaacaaaaatgacatcaag
gcactgaaagaaacacatatccccaatgaaatcctttccactgtggacgaattcaagaaa
ttagtaaaggaggaaagaaacatcagttcagatatagctcatatatcctcccggattcat
gataaaatcaaatctgaaacagaagcccttgtccgcctcgtctccatcctctcttcaggt
ataaagaaaaacaaagccgctctcgataagctcaagttagaagcagcacaagagcttcgt
aatgctgagattgctcagcgtacgaaagatacaccaggagcactccagtacgaaaatgtt
gctccctatgaatatttctcacgccttgtctctaattttgaaaatgacatgctcaagtac
agacaacaaattgatgaaactgagcaacatttgcatgcctcggcctcttccgcagctcta
agccctgaagatctatccaaggcaattcgtaaaatacatgaggcttttacaagtcttgct
ggtcgttatcagcacatacacgactgtattcaggaacaaaagactctctatgttaaatta
cacagacaaatctatggagtgtcaacagatttatttgatagttctaaacctaaacttgtc
aagcgcatcatgaccatggagggaccctctccttttatattaggacatagagatcctttt
tcagccgttagagctaatttaactgctcaaccgcaacagtcctcaattaacaatgccaat
tccgcaccctctggacccccaactatgggtctgggatcaacttcctcattcggaattgga
aacagtctcacgccgcaaataggacaaactaataataccacctttagcgtatttcctcca
tcatcccaaactacacagcagcaaggtgtgttaggttccacgatgtctccttttagtacg
agattctgctga
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