Lepeophtheirus salmonis (salmon louse): 121122709
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Entry
121122709 CDS
T08214
Name
(RefSeq) cell division cycle protein 20 homolog
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121122709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121122709
03036 Chromosome and associated proteins [BR:
lsm03036
]
121122709
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
121122709
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
121122709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
EIF3I
ANAPC4_WD40
Beta-prop_WDR19_1st
WDR55
Beta-prop_EML
Beta-prop_HPS5
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_Vps41
WDR54
MIOS_WD40
Ge1_WD40
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
121122709
NCBI-ProteinID:
XP_040573671
UniProt:
A0A0K2TAZ6
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All DBs
Position
1:complement(25237345..25239024)
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AA seq
454 aa
AA seq
DB search
MKNTLQLESTLSMSPTRGRSKSIEGYGNTPKSLTVPPQMDERRHSDSSNDRFIPNRSTTD
YEFATHAISRRGLSSTFLVDNEPADAEGQKILSFNSSAPKPQDYYVNSLKVLYSTSASTT
KHNIESKVRHIPNTPVKVLDAPNLSNDFYIRVMDWSSDNILSVIFSSRVLLWNANDTSVD
NLTEHPEGSEYTCVAWENKYLAIADYSGHITLWDASVKKCLRRLSGHFNRVGTLGWSEHN
LASGSRSGEVLIHDVRIKNHIICTLNEHTQEVCGIDWNSGGTLLATGGNDNTVFIWDIRS
LDKPTKVLTQHQSAVKGIKWCPWSNITLATGGGTSDRCLKIWNASNGNCVKSIDTGSQIS
SVLWNSDYKEIITGHGFSSNQLSIWKYSSLGKIKDLEGHSSRIICLAMNPDCSIVASAAG
DESIRIWEVWPPKEKSKKVSKSLTTKTTLFQKIR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatacattgcaattagagagtacattgtctatgtcgccaactcgtggacgatcc
aaatcgattgaaggatatggcaacacaccaaagagtctcactgttcctcctcaaatggac
gaacgtcgtcattctgatagcagtaatgatcgttttatccctaatcgttcgactacagac
tatgaatttgccactcatgcaatatcacgtagaggattgtccagtacttttttggtggat
aatgagcctgcagatgctgaaggacaaaagatactctcatttaattcatccgctccaaag
ccacaggattactatgttaactcactcaaagttctatactctacatctgcaagcacaaca
aagcataatattgagtccaaagttagacatattcctaatactcctgttaaggtccttgat
gctccaaatttaagtaatgatttctatattcgtgtaatggattggtcttcagacaatatt
ttatcggttattttttcttcaagagtcttactttggaatgcaaacgacacgtcagtggat
aacttaactgaacatccagagggatccgaatatacctgtgtagcatgggaaaataagtat
ttggctattgctgattactcaggacatattactctatgggatgctagtgtcaaaaagtgc
ctcaggcgattgagtggtcattttaatcgtgtgggaacattgggatggagtgaacataat
ctagcttctggttctaggtcaggggaggttttaattcatgatgttcgtatcaaaaatcat
atcatttgtacattaaacgaacatacacaagaagtatgtggcattgattggaattcagga
ggcacccttttggcaacagggggtaatgacaacactgtgtttatatgggacataagaagc
ctagacaaaccaaccaaagttcttacacaacatcaatctgccgtaaaaggtatcaaatgg
tgtccatggtctaacatcactttagcaactggtggaggaacatctgatcgatgtctaaaa
atatggaatgcgagcaatgggaattgtgtcaagtcaatcgataccggctctcaaataagt
tctgtattatggaatagtgactacaaggaaattattacaggtcatggattttcctctaat
cagttgtcaatctggaagtattccagcctaggaaaaatcaaggacttagagggacattca
tctagaattatatgcttggcaatgaatccggattgctcaatagttgcttccgcagcggga
gatgaatctattcgcatttgggaagtatggccaccaaaagagaaaagtaagaaggtttcc
aagtctcttacgaccaagacgactttatttcaaaagataagatga
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