Lepeophtheirus salmonis (salmon louse): 121122742
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Entry
121122742 CDS
T08214
Symbol
vas
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsm03036
]
121122742 (vas)
Enzymes [BR:
lsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121122742 (vas)
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Gene silencing
piRNA pathway
121122742 (vas)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
121122742
NCBI-ProteinID:
XP_040573713
UniProt:
H9D2Z4
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All DBs
Position
8:7380497..7383201
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AA seq
539 aa
AA seq
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MSDGGWGTDLHDGDSKKGNGDFKSDRPPRSKGCFNCGEEGHIASSCSQPQKSRRFGEDGK
KNSSEGGDGVQREVYIPTEVEEDDLFSTSISSGINFDKYDSVQVDVKGTGDLPPKINCFS
ELNLRELLVRNIGLSGYKKPTPIQKTGIPLILAKRDIMACSQTGSGKTAAFLLPIIQFIL
QKGEFSSASSQQKPSCLIVAPTRELAIQIKDEARKFSKGSMIKSVVLYGGTSVGYQCSQI
VRGVDILIATPGRLLDLVSKGAVSLDAVQFFVLDEADRMLDMGFLPEVKRIVSEGNMCCK
TSRQTLMFSATFPYEVQSCAAEFLNDYVFVTVGIVGGVNTDVKQDFYQVEKFKKRQKLKD
ILDDVGTLKTLVFVETKKNTDFLASWLSENNVPTTSIHGDRLQSQREQALADFRSGKYPV
LVSTAVAARGLDIKGVEHVVNYDLPKTVDEYVHRVGRTGRVGNKGKATSFYDGNEPMDRT
LAHELLKVLREGDIEIPEWMQGDNSMDDNGASSGFESHTRSQPVASTSVINNEEEENWE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacggtggttggggtactgatctccacgatggagactctaaaaaagggaatgga
gactttaagtctgatcgacctcctcgaagtaagggatgcttcaactgtggagaagaagga
cacatcgctagctcatgctcacagccccaaaagagtcgacgctttggtgaagatgggaaa
aagaactcttccgaaggaggagacggagttcaaagggaagtttatattcctacagaagtg
gaagaggacgatcttttctcaacctccatttccagtggaataaatttcgataagtatgac
tccgtgcaggtggatgtcaaaggcaccggggatttacctcccaaaattaattgtttttca
gagttgaatcttcgcgaactccttgtaaggaatatcgggctctctggttataaaaagcca
acaccgattcagaagactggtatacctcttatactggcaaaaagggacataatggcctgt
tcacaaacgggaagtgggaaaaccgcggcctttctcctccccattattcaatttatttta
caaaagggggaattctcctcggcatcctctcaacaaaagccatcctgcctcattgtcgct
cctacaagagagcttgccattcaaattaaagatgaggccagaaaattttccaagggctcc
atgatcaagtctgtagtactctatggcggtacttccgtaggatatcaatgctcacagatc
gtaaggggagtggacattctaattgccacaccgggacgactactcgatttggtatccaaa
ggagctgttagtttggatgccgtacaattttttgttctcgacgaagcggatcgaatgttg
gatatgggttttcttccagaggtcaagaggatcgtttctgaaggaaatatgtgctgcaaa
acaagtcgtcagactctcatgttttctgctacttttccctatgaggttcaaagttgtgct
gcggagtttctcaatgactatgtatttgtaacggtgggtattgtcggaggtgtcaacacg
gatgtgaaacaagacttttatcaggttgagaaattcaaaaaacgccagaaattgaaggac
atattggatgatgtaggcactctaaagacgctagtatttgttgaaaccaagaagaatact
gattttctcgccagttggctctcggaaaacaatgtaccaacgacttcaatacatggtgat
cgtctacaaagtcaaagagagcaagctctagcagatttcagatcagggaaatatcccgtc
cttgtctcaactgcggttgctgctcgtgggttggatataaagggagtggaacatgttgtt
aattatgatctccctaaaactgtcgacgaatatgtacatcgtgtaggacgtacagggcga
gtcgggaacaaaggaaaggcaacaagcttttatgatgggaatgagcctatggatcgaacg
cttgcacacgaattgcttaaagttctgagggaaggagatattgaaatacctgagtggatg
caaggagataattcaatggatgataatggtgctagttcaggctttgagtcccatacccga
agtcagcctgttgcttctacttccgtcattaataatgaagaagaagaaaattgggaatga
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