Lepeophtheirus salmonis (salmon louse): 121122811
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Entry
121122811 CDS
T08214
Symbol
Regnase-1
Name
(RefSeq) uncharacterized protein Regnase-1 isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121122811 (Regnase-1)
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
121122811 (Regnase-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
zf-CCCH_2
zf-CCCH_4
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
121122811
NCBI-ProteinID:
XP_040573797
LinkDB
All DBs
Position
8:complement(31961994..31973038)
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AA seq
759 aa
AA seq
DB search
MAIIMKNYMKSLIQQQSPSLSSSNSSKIDLFDNLIILQDKVESGKDSLHDESITKSPSWE
QQQQMQIHSYSMNCKHNNNNSKNNLVPPAPLSHTGIYRTLSDTSAEFLDKRKKLESEDSS
YDSDYELSGMSKSHDDVSRTFSDTLASEFSEYVSLASSSSKSQQEEEGGCDEFSFSSDPD
YNGKVEFALRLGYPESLLVKALRKLGPLAGQDKILAELIRLQNSKPSVLHTDLEKPVPQE
EITTLCKSALGEENEKDSLLPIVIDGSNVAMSHGNKEIFSCRGIQLCVNWFKEKGIKNIT
VFVPRWRKESSKPESPISDQHILNELEKERILAYTPSRQVGGRRVVCHDDRYILNLASET
GAIVVSNDNYRELLAEKPEYKEVISKRILMYSFVNDRFMPPDDPMGKNGPTLHAFLRGLS
RNSDIHHSMPCPYGKKCTYGNKCKYYHAERGNLPQKSITDKLKEHSTLRISEVRARIHSR
DSSPGDPLTRTLSVNMPPRIHEKQQLCRTQSNISSRIFDRSHTNNQLYASHQQNLLTTSP
SSSTHHKVYNSKSISFENLPPLNASPSYTDYSVPPPPPRTPWQQQQSGSSSPRRHSTTSS
PYKLDSNNAHLKLSRQLSLNPCYDPRLQRFLCPPPTSHQNVSRIASAPEFYIGGSNLGFG
TSLTYVTPDTPTLLQKTVSDSVSVDSSEWNSGTSERINYGPIGSSRKNSCNVVSSRHKLF
VHLKEIFSENQVLQAMSVLPDETDGQKICEHIISMNSQK
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggctatcatcatgaagaactatatgaagtcattgattcagcagcaatctccttcccta
tcaagttccaactctagtaaaatcgatttattcgataatttgatcattcttcaagacaaa
gtagagagtgggaaggacagtcttcacgatgaatccattactaagagtccatcttgggag
caacaacaacaaatgcaaattcattcttattcaatgaactgcaagcataataataataat
agtaaaaacaatcttgttccaccagcaccactatcgcacactgggatttatcgtactttg
agtgatacaagtgcagaatttttagataaaaggaaaaagttggaatccgaggattctagc
tatgactctgactatgagttatctggcatgtccaagtcacatgatgatgtatcaaggact
ttttcagatacattggcctcggagtttagtgaatatgtctcattggcttcctcctcttcc
aaaagtcaacaggaagaggaaggaggatgtgatgaattttccttttcctctgatcctgat
tataatggaaaggttgaatttgctttgagattgggatatccagaaagtttattagtaaag
gctcttaggaagttaggtcccttagctggacaagataaaattcttgcagaattaatacgt
ctacaaaattcaaagccttccgttttacatacagaccttgaaaaacctgtaccacaagaa
gaaattactactctatgtaaaagtgcgttaggagaagaaaacgaaaaggatagtttatta
ccgatcgtcattgatggaagtaatgtagctatgagccacggaaacaaggaaatattttct
tgtagagggattcagctatgtgtcaattggttcaaagagaaaggaattaaaaatatcact
gtatttgttccaagatggaggaaagaatcttctaaacccgaatcccctatatcagatcaa
catattctaaatgagttggaaaaggagcgtattttagcatatactccctcccgacaagtc
ggcggaagaagagtagtttgccatgatgaccgatatattcttaatcttgcttctgaaact
ggagcaattgttgtcagtaatgataattatcgtgaactgcttgcagaaaaaccggaatat
aaggaggtcatttcaaaaagaattcttatgtactcctttgtgaatgatagatttatgcca
cctgatgatcccatggggaagaatggtccgactcttcatgcatttttaaggggtttgtca
agaaattcggatatacatcactctatgccctgtccatatggtaaaaaatgtacttatggt
aataaatgcaagtattatcatgctgaaaggggcaatttgcctcaaaagtcaatcacggac
aaacttaaggagcattcaactctgcgtatcagtgaagttcgtgcaagaattcattctcgt
gactcttctcctggggatccgttaactagaacattatctgtaaatatgcctcctcgaatt
catgagaaacagcaactttgtcgaactcaatcaaatatttcttcgagaatctttgatagg
agtcatacaaataatcaattatatgcttcacatcaacaaaatcttttaactacttctcct
tcttcgtcaacacatcataaagtatataatagtaagagtataagctttgaaaatcttcct
cctctcaatgcatcaccttcatatacagactattccgtaccacctcctcctcctcgaact
ccttggcagcaacaacaatccgggtcatcttctcctcgtcgtcattctacgacatcatca
ccttataaattggactcaaataatgctcacttaaaattaagccgtcaactttcactgaat
ccatgctatgatccccgactccagcgatttctttgtccaccacccacgtcacatcaaaat
gtttctcgaatcgcttctgcacctgaattctacattggaggttcgaacctaggttttggt
acgagtcttacctatgttactcctgatactcctaccctcttacagaaaactgtatccgat
agtgtttcagttgattcttctgaatggaatagtggtacttctgaaagaatcaattacgga
ccaattggttcgtcaaggaagaatagttgtaacgttgtgtcttctagacataagttattc
gttcatttaaaggaaattttctctgagaatcaagtgctacaagccatgtccgtccttcca
gatgaaacagatggccaaaaaatttgcgaacatattattagcatgaattctcaaaagtga
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