Lepeophtheirus salmonis (salmon louse): 121122837
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Entry
121122837 CDS
T08214
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-A
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121122837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121122837
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121122837
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_12
TPR_10
Motif
Other DBs
NCBI-GeneID:
121122837
NCBI-ProteinID:
XP_040573834
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Position
8:complement(3017559..3019822)
Genome browser
AA seq
409 aa
AA seq
DB search
MEYIKGNPRKAHKLLANLVIENGNSEVDSFYHNNVGIVHIMQDKPNLASHYLQEALEKTI
KLFDEEENKKDISEGRTTPEYLLINKKIEITYNLAIALLNSGTYTELSFEYFIKTLPMFQ
KRPSLWLHMAECCIQSYQQLNSVPTYSDSVASIRDLKHKSTTLTSIGPIQYQKIVLTDSG
GHPFTHPGVSVPVPLNPPKNNNLNLDFALSCLRNASVLIKMNRYKQESLFAATLVNHSYV
CLLIKDYVTAFHKAQELLDFLVSASTHIKDGSTYKLLGHLYAGEALIYLDRISEATEHLG
PLTLQSLDTEMSSGGDESDDCFKKNTPYGGLGFSALNFNLSVAFALRGELDKAKGVLDKS
TGPKSVELATKITMMNLYIYIMKKDMKTCREIIQENCDVVKIPFTAQAK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggagtacatcaaagggaatccaaggaaggctcataaactattggctaaccttgtgata
gagaatggaaactcggaagtggattcattttaccacaacaatgttggcatcgttcatatt
atgcaggacaagcccaaccttgcatctcattatttgcaagaggctctagaaaaaacgatt
aagctctttgatgaagaagagaataaaaaagacatatctgaagggagaaccacccccgag
tatttgctcatcaacaaaaaaattgaaatcacatataatttggcaatagctcttctcaac
tctggaacatacacagagctcagctttgaatactttatcaaaacccttccaatgtttcaa
aagaggccttctctatggctccacatggctgagtgttgtatccagagctaccaacaactg
aactctgtgcctacatactcggactcagtcgcttccatccgggatttgaagcataaaagt
acgactctcacaagtataggtccaattcagtatcaaaaaatagttttgactgactctggg
ggacatccctttacacatcccggagtatccgttcctgttccattaaatccacccaaaaat
aataatttgaatttagattttgctctctcttgcttgaggaatgcaagtgttctgattaaa
atgaacagatataaacaagagtccttgtttgctgcaacccttgtcaaccatagttatgtt
tgtcttttgataaaagactatgtaactgcctttcataaagcacaagaactcttagatttc
ctcgtgtccgcctccactcatattaaagatggctccacctacaaattactcggacacctc
tacgcgggagaagctctaatctatttggatcgtatatctgaggctactgaacatttgggt
cctttaacacttcagtccttggatacagaaatgtcatctggtggggatgaatcagatgat
tgtttcaaaaagaatacgccctatggtgggcttggattttcagccctcaactttaatcta
tctgttgcctttgctcttcgaggtgaattggataaggcaaaaggggtgttagataaaagc
acgggtcctaagagtgtagagcttgccacaaaaattaccatgatgaatctttatatatat
ataatgaaaaaggacatgaaaacttgtcgggaaattattcaagagaattgtgatgttgtt
aaaataccttttactgctcaggctaaataa
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