Lepeophtheirus salmonis (salmon louse): 121122883
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Entry
121122883 CDS
T08214
Name
(RefSeq) glycine receptor subunit alpha-2 isoform X1
KO
K05195
glycine receptor alpha-3
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04080
Neuroactive ligand-receptor interaction
lsm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121122883
04082 Neuroactive ligand signaling
121122883
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsm04040
]
121122883
Ion channels [BR:
lsm04040
]
Ligand-gated channels
Glycine
121122883
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
YebO
Motif
Other DBs
NCBI-GeneID:
121122883
NCBI-ProteinID:
XP_040573893
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Position
8:2019475..2023171
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AA seq
476 aa
AA seq
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MFFKWNIIFLIVQLYSQLEIVVNGKSIDLEDLLAEQKRQNELISRLLQNQVNLQRVSFRQ
EDPYYRRGKKLFFMPDDYDKRRLPPRVKEGEVNKIHVSIDIYGIPLLDEKLELNSHQSPF
SSYSAEAEIMLELKISHMWADLRLNTSEMKRPLELEPTSISDFWTPDSYFHHVKASNEVK
IMTPVASLRVRPDKIIQYTKIILVTLGCPMSFYNYPMDNQICRLELQSFGYDMNLINYTW
MRPPQMKKDIIIDNHDVEIADYTFEYSPEGIRFSGLGIRIELKRHLGFHITQSYIPSIIF
VAIAWMSFHVPSDVVPGRMVLSVTTLLTLISMFNSVRSLTPQVSYMKALDLWVFVCLVFV
FSSLAEYGFVLYLTSRSGWQKKVDADIRTISGSDRLVNPANFLRLISGGMIQRTQKNYST
ANMNGVVSKVMPKTKERVAYSIEYIIKIIYPLAFFGFNYTYWTYYLSRYSNKLDPS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcaaatggaatatcattttcctaattgttcagctttattctcaactcgaaata
gtcgtgaatggtaaaagtattgaccttgaggatcttcttgcggagcaaaagagacaaaat
gaattaatttcccgtttactccaaaatcaagtcaatttgcaaagggtatccttccggcaa
gaggatccttattatcgaagaggaaagaaattatttttcatgccagacgactatgataag
cgaagattacctcccagagtgaaagaaggtgaagtgaataaaatccatgtttctatagac
atatatggaatccctctattggacgaaaagctcgagttaaattctcatcagagcccattt
tcatcctatagtgccgaggcggaaatcatgttagagctcaagatatctcatatgtgggcg
gatcttcgacttaatacgagtgaaatgaagcgacccttggagctagagcctacatccata
agtgatttttggactccggactcttatttccatcacgtaaaggcttcgaatgaagtcaaa
atcatgacccccgttgcaagtctgcgtgttcgcccagacaaaattattcagtatacgaaa
atcatattggttacgcttggatgccccatgtccttttataattatccaatggataatcaa
atttgtcgattggagcttcaaagctttggatacgacatgaatctcattaattatacttgg
atgcgtccacctcaaatgaaaaaggatataataattgataatcatgacgtggaaatagca
gactatacatttgagtattcgcctgaaggaataagattctctggacttggaattcgaatt
gagctgaagagacatttaggttttcacatcacacaatcatatattccaagcattatcttt
gtagcgattgcttggatgtcatttcatgtaccaagtgatgttgtacctggtcgaatggtt
ctctcggtaacaactcttctgactctcatttctatgttcaattccgttaggagtctgact
ccgcaagtatcgtacatgaaggcattggatctatgggtttttgtatgtttagtcttcgtt
ttttcctctttggcagagtatggttttgtcttatatttaacgagtcgttcaggatggcaa
aagaaagtagatgcagatatcagaacaatctctgggtcagatagattggtgaatcccgca
aacttcctccgtttaataagtggaggaatgattcaacggacacaaaagaattactcaact
gcaaatatgaatggagttgtgtcgaaagtcatgccaaaaacaaaggaaagagtggcttat
tctatcgaatacataatcaaaattatatatcctttggccttttttgggtttaactacaca
tattggacttattacttgtctcgatattctaataaacttgatccttcatga
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