Lepeophtheirus salmonis (salmon louse): 121122996
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Entry
121122996 CDS
T08214
Name
(RefSeq) LOW QUALITY PROTEIN: 26S proteasome regulatory subunit 7-like
KO
K03061
26S proteasome regulatory subunit T1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121122996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lsm03051
]
121122996
Proteasome [BR:
lsm03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
121122996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PRS7_OB
AAA_lid_3
AAA_22
AAA_16
AAA_5
AAA_2
nSTAND3
DUF815
RuvB_N
AAA_7
AAA_14
Prot_ATP_ID_OB_C
AAA_28
AAA_24
AAA_18
AAA_33
RNA_helicase
TIP49
Mg_chelatase
Sigma54_activ_2
AAA_3
Sigma54_activat
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
121122996
NCBI-ProteinID:
XP_040574009
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All DBs
Position
8:3020005..3021588
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AA seq
435 aa
AA seq
DB search
MGKDYLGEHMRRSNDKEDKDEIEVKPLDESDIALLKAYGQGQYSKSLKQVETDISEITKR
VNELAGIKESDTGLGPPAVWDLAADKQVLQSEQPFQVARCTKIINADSDNPQYIINVKQF
AKFVVDLAESVAPTDIEEGMRVGVDRNKYQIHIPXPPKIDPTVTMMQVEEKPDVTYGDVG
GCKEQIEKLXEVVETPLIHPERFVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFI
RVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARYDDGAGGDNEVQRT
MLELINQLDGFDPRGNIKVLMATNRPDILDPALMRPGRLDRKVEFGLPDMEGRTNIFKIH
ARSMSVERDIRYELLARLCPNSTGAEIRSVCTEAGMFAIRSRRKVATEKDFLDAVNKVIK
AYAKFSSTPKYMTYN
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagactacttgggagagcatatgcgacgtagcaatgacaaggaggataaagat
gaaattgaagtgaagcccctggacgagtcggacattgcactgctcaaggcctatgggcag
ggacaatactccaagtccctgaagcaagtggagacggatatttccgaaatcacaaagcgt
gtcaacgaactagctggaataaaggagtcagacacgggtttgggtcctccagccgtttgg
gatcttgctgctgacaagcaggtccttcaatcggagcagccctttcaagtcgcacgatgc
accaaaatcatcaacgccgactcggacaatccacaatacatcatcaatgtcaagcaattt
gccaaattcgtggtggatctcgccgaatcagtagccccaacagacattgaagaaggaatg
cgcgtgggtgtggatcggaacaagtatcaaatccacattcccnttcctcctaaaattgat
cccacagtcacgatgatgcaagtggaggaaaaaccagatgtaacctacggagatgtcgga
ggctgcaaggaacaaattgagaagctgnaggaagtcgtagaaacacctcttatccaccct
gaaagattcgtgaatcttggcatcgaaccaccgaagggtgtacttctatatggaccccct
ggtacaggaaaaaccctttgcgcccgagctgttgctaatcgtacggatgcttgcttcatt
cgagtcattggctctgaacttgtacaaaaatatgtgggtgaaggagctcgaatggtgaga
gagctctttgaaatggcacgcactaagaaagcctgtctcattttctttgatgaaattgat
gctgtgggaggggctcgctacgatgatggtgcggggggagacaatgaagttcagagaaca
atgttggagctcattaatcaacttgatggatttgatcctcgaggtaacatcaaggttctt
atggctacgaatagaccggatattttggatcctgctttaatgcgacctggaagattggat
cgtaaagtggagttcggacttccggatatggaaggaagaactaatatattcaagatacat
gcccgttctatgtccgtggagagagatattcgttatgaactcctggcacgtctatgtccc
aactcaacgggtgctgaaattcgaagtgtctgtactgaggcaggcatgtttgccattcgc
tcaagaaggaaagtagcaaccgaaaaggatttcttggatgctgtcaataaggttattaaa
gcctatgctaagttttcatccactccaaagtacatgacttacaattaa
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