Lepeophtheirus salmonis (salmon louse): 121123033
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Entry
121123033 CDS
T08214
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03015
mRNA surveillance pathway
lsm04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121123033
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121123033
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsm01009
]
121123033
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121123033
03036 Chromosome and associated proteins [BR:
lsm03036
]
121123033
Protein phosphatases and associated proteins [BR:
lsm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121123033
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121123033
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121123033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
121123033
NCBI-ProteinID:
XP_040574042
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All DBs
Position
8:complement(13850160..13854470)
Genome browser
AA seq
463 aa
AA seq
DB search
MDIKKSLIKYLEKNPPKDTDSIDEDELFLHEYAAVHLEPPKGIPTFYYPSGLPEHPLACR
LREEARAKILKRKENELINNTELKNLWTLLDSHASSTKENDDKYLTYHDYKRVRKESDPK
VQSFLSSRLYLTLAEESSGRLLVATLFDYIMRKTWLLQTRIELSLYDKDGSGFLEETDLE
TYLGELIHTLPKLDILEKSFHPFYICTAVRKFYFFLDPIRTGKIKIRDILASGFLDDFLE
LRDQEAGKDLQESNWFSGPSVLRIYGQYLNLDNDHNGMLSPSELKNYGTGTLTDTFIQRV
FQECLTYDSEMDYKTYIDFVLAFENRKSPQSLRYFFRILDIKQQGYLDHFTLNYFFKDIL
KEMDKLKQEPVLFEDVMDEIFDMISPKDPNRITLQDLVNSKQGNTIISILIDLNGFWCHE
SREDYITEEDEDLPKLQIKCFLSQILGRFLCFGHFIFICSLHH
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggatattaaaaaatctctgattaaatatttggaaaagaatcctccaaaggacacggat
tccattgatgaggatgagctctttcttcacgaatatgccgctgtacatcttgagccacca
aaaggaattcctacattttactacccatcaggtctgccagaacatcctttagcctgtcgg
cttcgtgaagaagcaagagcaaagattcttaaaagaaaagaaaatgaactcattaacaat
acggaattaaaaaatctttggactctactggattctcatgcctcatccactaaagaaaac
gatgataaatatcttacttatcatgactataaaagggttcgtaaggaatcagatccaaag
gtacaatcctttctttcatccagactgtatctcactttggctgaagagtcttctggccgc
cttctagttgcaactctctttgactacatcatgcgtaaaacgtggttactacagacacgc
attgaactatcactctatgataaagatggctctgggtttcttgaagaaacggacttagag
acttatttgggggagctcattcatactcttccaaaattggatattctggaaaagtccttt
catcccttttatatttgtacagctgtgagaaaattttatttttttcttgatcccattcgt
acgggtaaaattaagatacgagatattcttgcctctggtttcctggatgactttttggaa
ttgagggaccaggaagcagggaaggatttacaagaaagtaattggttttcgggaccctct
gttttgaggatatatggtcaatacttaaatcttgacaatgatcacaatggaatgctctcc
ccgagtgagctaaaaaattatgggacagggactcttactgatacttttattcaaagagtt
tttcaagagtgccttacctacgactctgaaatggactataaaacctatatagattttgtg
cttgcttttgaaaatcgcaaatctcctcagtccctccgatatttctttcgtattttagat
attaaacaacaaggttacttggatcattttactcttaactacttttttaaagatattttg
aaggaaatggacaaattaaagcaagagccggttctctttgaagacgtcatggatgagata
tttgatatgatttctccaaaagaccctaataggataactcttcaagatttagtcaactct
aaacaaggaaataccattatcagtattttaattgatctaaacgggttctggtgtcatgag
agtcgggaagattatattacagaggaagatgaagatctcccaaaactacaaatcaaatgt
ttcctttcacaaatcctaggacgctttctttgctttgggcatttcatatttatatgttct
ttacatcattaa
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