Lepeophtheirus salmonis (salmon louse): 121123040
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Entry
121123040 CDS
T08214
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-1
KO
K04863
voltage-dependent calcium channel beta-2
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsm04040
]
121123040
Ion channels [BR:
lsm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121123040
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Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
SH3_2
Motif
Other DBs
NCBI-GeneID:
121123040
NCBI-ProteinID:
XP_040574052
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Position
8:14335801..14339850
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AA seq
736 aa
AA seq
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MTGYDGGGDAVIMSNRQTLNNINNRSMLEATAYDNLIRQGSGESSYSHPSSEISLGDSYG
GGIDPTSCHQPLPHQSVVMNAGYARDTEQNALICLERARSKPVAFSVRTNVMYDGSQDDD
SPVHGSAVSFHIGDFLHIFEKYDVNWWIGRIVKEGCDIGFIPSPAKLEQLILQQAPVGKG
SKLKSQSSGNIQQVMTNSRGSTPPTPGLDLDQNGDTGGSGVRVTAPPVIERKKGLLGKKQ
ETLSPYDVVPSIRPLVIVGPSLKGYEVTDMMQKAVFEYLKNRFIGKIIITRVTADISLGK
KSVLNNPSKRAILDKANFRSSNLAEVQSEIERIFELSRSMQLIVLDCDTVNHPSQLAKTS
LAPIVVYLKISSPKVLQRLIKSRGKAQSRNLNVQMVAAEKLQQCPPEMFDVILDENQLDE
ACEHLTEYLDSYWRAANPPLKMGNNVPSTPATKARKSENNPTSGTVTVPPDPNASPSGVG
GGHMSSSHNRRGVSAGNGNGEQIPPQQNRRGEHVTLSPGAYHHPHHHPSQQTPTQSQQQQ
QQPHLPPQPSHALPPLPSHRQQSQQQDFRVYDRGGSQYHVQDTWYDEEDVGVEEDDGRYR
QNNIPEEMGYPSRDHHYIDERNNYPDDGRGYNNRGGRYYNQGGDRQYPPHELDYDDRYYD
GGVGGGVGGGVGVGGEYYDQGHNPAPHHQFPNKSSINNTHGGRGGMIPAHHQKRPLQRYE
DDFHEIRQRYDEEEEY
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaccggatatgacggtggaggagatgcggttataatgagcaatagacaaactttaaat
aatataaataatcgttcaatgctcgaggccactgcatacgataatttaattcgacaaggt
tccggagaatcaagctattctcatccctcttctgaaatatcactgggagactcctatggt
ggaggtattgatccaacttcctgccatcagccacttccacatcaatctgttgttatgaat
gcgggctacgctcgagataccgaacaaaatgctctgatatgcctggaaagagcaagaagt
aagcctgtagccttttcagtacggacaaacgtcatgtacgatggaagtcaggatgatgac
tctccggttcatggctcggctgtctcctttcacattggagattttctgcacatatttgaa
aagtatgatgtcaattggtggattgggcgtatcgttaaagaaggctgtgatattgggttc
attccgtctcctgcaaagttggagcaattgatacttcaacaagctcctgttggaaaggga
tccaaactgaaatctcaatcttctggaaatattcagcaagttatgaccaattcacgtgga
agtactcctcccacccctggacttgatcttgatcaaaatggggatactggaggaagtgga
gtccgagttacggctccacctgttattgaacggaaaaaaggactcctcggaaaaaaacaa
gagactctttctccgtacgatgttgtgccttccatccggccactcgtgatagttggaccc
tccttaaagggctatgaagtcacggacatgatgcaaaaagcggtgtttgaatacttaaaa
aaccgttttataggaaaaatcatcattacccgtgttactgcagacatttctttaggaaaa
aaatccgtgctcaataatccatcaaaacgagccatcttagacaaagcaaactttagatcc
tctaatttggctgaggttcagtctgagatcgaaaggatctttgaactctcgcgaagtatg
caactcatcgttctcgattgtgatacggtcaatcatccttctcagctagctaaaacctcc
ttggcacccattgtagtttatttaaaaatttcatctccaaaagtactccaaaggcttatt
aaatctcggggtaaggctcaatcccgaaatctaaacgtccaaatggttgctgctgagaaa
ctccaacaatgtccgccagaaatgtttgatgtcatattagatgaaaatcagcttgatgag
gcatgcgagcatctgaccgaatacttggattcttattggagagctgccaatcctcctctg
aagatgggtaataatgtgccgtccactccggcaacaaaagcccgtaaatctgaaaacaat
ccaacgagtggaactgtaactgttcctccagatcccaatgcttcccccagtggcgttggt
ggtggtcacatgagttcctcccataatcggagaggtgtaagcgctggaaatggtaatgga
gaacagattcctcctcaacagaatcgaagaggggaacatgtgactctatctccaggagca
taccatcaccctcatcatcatccatcccaacaaacacccactcaatcccaacagcagcaa
cagcaaccgcacctaccaccccaaccctcacatgctctgccccctctcccttctcataga
cagcagtcacaacaacaagactttcgtgtctatgaccgtgggggttcacagtatcacgtc
caggatacatggtacgatgaagaggatgtgggagtggaagaagacgatggtcggtatcgt
caaaataatattccggaggagatgggctatccatctagagatcatcattatatagatgag
cgtaataactatccagatgatggccgaggatataataatagaggagggagatactacaat
caaggaggtgatcgccaatatccaccccatgaattagactatgacgatcgatactatgac
ggtggtgttggtggtggtgttggtggaggagtaggagtaggaggtgaatactatgaccaa
ggacacaatccagcccctcatcatcagttccctaataaaagtagtattaataatacacac
ggcgggagaggaggaatgatacctgctcatcatcaaaagaggcccttacaaagatacgaa
gatgattttcatgaaattcggcaacgatacgacgaggaggaagagtattaa
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